Gossypium hirsutum (upland cotton): 121208560
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Entry
121208560 CDS
T04793
Name
(RefSeq) syntaxin-61-like
KO
K08500
syntaxin of plants SYP6
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
121208560
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ghi04131
]
121208560
Membrane trafficking [BR:
ghi04131
]
SNARE
SNAP-25[C] (Qc)
STX6
121208560
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GFIT
Motif
Pfam:
STX6_10_61_N
SNARE
Trypco2
DUF3958
Motif
Other DBs
NCBI-GeneID:
121208560
NCBI-ProteinID:
XP_040935466
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All DBs
Position
A10:2674851..2676941
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AA seq
238 aa
AA seq
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MSKAQDPFYIVKEEIQESIDKLQSSFHQWERIRPENEQRVRLTKELFTNCKSIEWQVDEL
DKAISVAARDPSLYGIDEVELENRRRWTSSARTQVGNVKKAVVAGKENGNSASAMHRELM
RLPDRSNRYTVEDNDDFISSESDRQMLLIRQQDEELDELSASVERIGGVGLTIHEELLAQ
EKIIDDLGNEMDSTTNRLDFVQKKVAMVMKTASATGQCMMISFLLGLFIILFILVFFT
NT seq
717 nt
NT seq
+upstream
nt +downstream
nt
atgtctaaagctcaagatccattttacatcgttaaagaagagattcaagaatctatcgat
aaattgcagtcaagttttcaccaatgggagaggattcgtcccgaaaacgaacaacgagtt
cgtctcacgaaagaactattcaccaattgcaagagcattgagtggcaggtagatgaattg
gacaaagcaatttctgtggcagctagggatccttcattgtatggcattgatgaagtggaa
cttgaaaatcggaggagatggaccagctctgctcgaactcaggtcgggaatgtgaagaaa
gctgtagtggctggaaaagaaaacggcaacagcgcaagtgcaatgcacagagaattgatg
aggctgccagatagatccaacaggtacaccgtggaagataatgatgactttatatcatcg
gaatcagacagacaaatgcttcttataaggcaacaggatgaggagttggacgagcttagt
gccagtgttgagagaataggaggtgttggtcttaccatacatgaagaacttcttgcacag
gagaagataatagatgatttaggtaatgaaatggacagcacaacaaacagattggatttt
gttcagaagaaagtagctatggttatgaagacggcaagtgcaacgggccagtgtatgatg
atatcatttttgctgggtttgttcattattctattcattctggtcttcttcacttga
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