Gossypium hirsutum (upland cotton): 121209457
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Entry
121209457 CDS
T04793
Name
(RefSeq) long chain acyl-CoA synthetase 7, peroxisomal-like isoform X1
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi00061
Fatty acid biosynthesis
ghi00071
Fatty acid degradation
ghi01100
Metabolic pathways
ghi01212
Fatty acid metabolism
ghi04146
Peroxisome
Module
ghi_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
121209457
00071 Fatty acid degradation
121209457
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
121209457
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
ghi01004
]
121209457
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ghi04147
]
121209457
Enzymes [BR:
ghi01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
121209457
Lipid biosynthesis proteins [BR:
ghi01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
121209457
Exosome [BR:
ghi04147
]
Exosomal proteins
Exosomal proteins of breast milk
121209457
Exosomal proteins of breast cancer cells
121209457
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-GeneID:
121209457
NCBI-ProteinID:
XP_040936080
UniProt:
A0ABM2Z018
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All DBs
Position
A11:120195292..120202583
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AA seq
713 aa
AA seq
DB search
MESPAQRRLNAIQSHLLPSAVYAAEDESLIGRNVTSSSSSPPFFVDQQYSVVLPEKLQTG
KWNVYRSARSPMKLLSRFDDHPEIGTLHENFVHAVETYRDYKYLGTRIRVDGTVGEYKWM
TFGEAATAREAIGSGLRYYGLEQGACVGLYFINRPEWMVVDHACSAYSYISVPLYDTLGP
DAVKFVVNHSGIKATFCVPETLNTLLSFISSIPSVRLIVVVGGADEHLPSLPSTPDVKFV
SYLKLLGQGRRNLQPFFPPKPDDVATICYTSGTTGTPKGVVLTHRNLIANASAFCRKVKF
YPSDVYISYLPLAHIYERSNQVICCNNGVGVGFYQGDNLKLMDDLAALRPTIFCSVPRLY
NRIYAGITNAVSTSGALKERLFRAAYNSKRQAIMNGRNASPIWDKLVFNKIKEKLGGRVR
ILGSGASPLSPDVMDFLRVSIGHIHSNWQQWCFGCMLIEGYGMTETSCIITLMDVGDVLA
GHVGSPHAACEVKLVDVPEMNYTSEDEPYPRGEICVRGPIVFQGYYKDEVQTREVFDDDG
WFHTGDIGLWLPGGRLKIIDRKKNIFKLAQGEYIAPEKIENVYAKCKFVSQCFVYGDSFN
SSLVAVVAVEPDVLRDWAASEGIQYEDLGQLCNDPRARNAVLAEMDDVGREAQLRGFEFA
KAVTLVPEQFTLENGLLTPTFKIKRSQAKEYFAKAIANMYAELSTSEPALSKL
NT seq
2142 nt
NT seq
+upstream
nt +downstream
nt
atggaatctccagctcaacgccgcctcaacgctatccaatctcacctcctcccttccgcc
gtatacgccgccgaggatgaatccttgatcggacgtaatgttacctcctcctcttcatct
ccaccgttctttgttgatcaacagtacagtgtggttcttcctgagaaattgcaaactgga
aaatggaatgtttacagatcagctcggtctccgatgaagcttttgagtcggtttgatgat
catcctgaaatcgggacattgcatgaaaactttgtacatgctgtggagacttatagagat
tacaagtacttgggaacgcggattcgggtggatggaacagttggggagtataagtggatg
acatttggagaagcagctacagctcgggaggctataggttctggacttaggtattatggg
ttagaacaaggagcttgtgttggactttattttataaaccgacccgagtggatggtggtt
gatcatgcttgttcagcatattcgtatatttcagttcctttatacgatactctaggtcct
gatgctgttaagtttgttgtaaaccattctggcattaaagctactttttgtgtcccagaa
accttaaatacgctgttgagtttcatatcttctattccatctgtacgtctcatagtggtg
gtgggaggagctgatgaacacttaccttcactcccctcaacacctgacgtgaagttcgta
tcgtatttaaaattacttggtcagggccgcagaaacctgcagccatttttccctcctaag
cctgatgatgttgcgacaatatgctacaccagtggtactacagggacaccaaagggagtt
gtcttgacacatcgaaatttaattgcaaatgcttctgctttctgccgaaaagtgaaattc
tatccctcagacgtttacatatcctatcttcctttggcgcacatttatgaacggtcaaac
caagtcatctgttgcaacaatggcgttggggttggcttctaccagggggacaatttgaaa
ctgatggatgatttagctgctcttagaccaactatattttgcagtgtgcctcgattatat
aatcgaatctatgctggaatcaccaatgctgtcagcacttctggtgctttaaaggagagg
ctatttagagctgcctacaattccaagaggcaagccatcatgaatggaaggaatgcatcg
ccaatttgggacaaattggtcttcaataaaataaaggaaaagcttggaggtcgagtacgt
attctgggatccggtgcttcccctctgtctcctgatgtaatggacttcttgagagtgtcc
ataggccatatccattcaaattggcaacaatggtgctttggctgtatgttaattgagggc
tatggcatgacagagacttcttgtatcataaccttgatggatgtaggggacgtcttagct
ggtcatgttgggtctccacatgctgcctgtgaagtgaaacttgtagatgttcctgaaatg
aattacacctctgaggacgagccatatcctcgtggggaaatttgtgtgagaggtcctatt
gtttttcagggctactacaaggatgaagtccaaacgagagaagtatttgatgatgatggc
tggtttcatacgggagacattggtttgtggttacccggaggtcgtctcaagattattgat
aggaaaaagaacatatttaagttggcacaaggcgaatacatagcaccggagaagatcgag
aatgtatatgcgaaatgcaaatttgtttcacaatgttttgtatacggtgatagtttcaat
tcatctttagtagcggtagttgcagtggaacctgatgttctaagagactgggctgcatct
gagggtatccagtacgaggatttaggacagctgtgcaatgatccaagagcaaggaatgct
gttctcgctgagatggatgatgtgggaagggaagcacagttaagaggctttgaatttgct
aaagctgtaactttggtgcctgaacaattcaccttggaaaatggccttctcactccaaca
ttcaagatcaagcgatctcaagccaaggagtactttgcgaaagccatagccaacatgtat
gctgagctttcaacttccgaaccggcactttcgaaactataa
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