Gossypium hirsutum (upland cotton): 121209496
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Entry
121209496 CDS
T04793
Name
(RefSeq) eukaryotic translation initiation factor 3 subunit E-like isoform X1
KO
K03250
translation initiation factor 3 subunit E
Organism
ghi
Gossypium hirsutum (upland cotton)
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
ghi03012
]
121209496
03051 Proteasome [BR:
ghi03051
]
121209496
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ghi04147
]
121209496
Translation factors [BR:
ghi03012
]
Eukaryotic type
Initiation factors
eIF-3
121209496
Proteasome [BR:
ghi03051
]
Eukaryotic proteasome
Assembling factors
Other assembling factors
121209496
Exosome [BR:
ghi04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
121209496
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
eIF3_N
PCI
EIF3E_C
RPN7
TPR_9
TPR_14
TPR_20
TPR_19
Motif
Other DBs
NCBI-GeneID:
121209496
NCBI-ProteinID:
XP_040936161
LinkDB
All DBs
Position
A11:complement(121507881..121516013)
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AA seq
388 aa
AA seq
DB search
MVDYAMDIHKSLYHTADVPQDMVERRVEVVARLKALEDAAAPLVSFLQNPNAVQELRADK
QYNLQMLNDRYQIGPDQIEALYQYAKFQFECGNYSGAADYLYQYRALCSNSERSLSALWG
KLAAEILMQNWDIALEELNRLKEIIDSKSFSSPLNQVQSRIWLMHWSLFIFFNHDNGRTQ
IIDLFNQDKYLNAIQTSAPHLLRYLATAFIVNKRRRPQFKEFIKVIQQDQCSYKDPITEF
LACVYVNYEFDGAQKKMKECEEVILNDPFLGKRVEEGNFSTVLLKDEFLENARLFIFETY
CRIHQRIDMGVLFEKLNLNYEEGERWIVNLIRNSKLDAKIDSETGTVVMEPNRLNVYEQL
IDHTKALKGRTYKLVSQLLEHAQAQPAR
NT seq
1167 nt
NT seq
+upstream
nt +downstream
nt
atggtcgattacgctatggatatccataagagcctttaccacaccgctgatgtccctcag
gacatggtcgagaggagagtcgaggttgtcgctcgtctcaaagctttggaagatgccgcc
gctcctctcgtctctttcttgcaaaaccctaacgctgttcaggaattgcgtgctgataaa
cagtataatctccagatgcttaatgaccgctaccagattggtccagatcaaatagaggca
ttgtatcagtatgcaaaattccaatttgagtgtggcaactactctggtgctgctgactat
ctgtatcagtatcgggctttatgtagtaacagcgaaaggagtttgagtgcattgtggggg
aagcttgctgccgagatactgatgcaaaactgggatattgctcttgaagaacttaatcgt
ttgaaagaaataatcgattccaagagcttctcatcacctttgaaccaagttcagagtaga
atatggctcatgcattggagcctcttcatctttttcaaccatgacaatggaagaacacaa
atcatcgacctatttaatcaagacaagtatctaaatgccattcaaaccagtgctccccat
cttctaaggtacttagccactgcttttattgtcaacaaaaggagaagacctcaattcaaa
gaatttatcaaggttatccagcaagatcagtgctcttacaaagatcccatcacggagttt
ttggcttgtgtttatgtcaactatgaatttgatggagcacagaagaagatgaaggagtgt
gaagaagtgatactgaatgatcccttccttggaaaaagagttgaagagggcaacttttct
actgtcctattaaaagatgagtttcttgagaatgctcgtctatttatcttcgagacatac
tgcagaattcatcagcgcattgatatgggggtgctttttgagaaactgaatttaaattac
gaggagggtgagagatggattgtgaatcttatccgaaactcgaaacttgatgcaaagatt
gattcagagactggaaccgttgttatggagcctaaccgattgaatgtttacgagcagctg
atcgaccacactaaggcccttaaagggcggacctacaagctagtcagccagcttctcgaa
cacgcacaagcgcagcctgcacgctaa
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