Gossypium hirsutum (upland cotton): 121209546
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Entry
121209546 CDS
T04793
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 57-like
KO
K14779
ATP-dependent RNA helicase DDX52/ROK1 [EC:
5.6.2.7
]
Organism
ghi
Gossypium hirsutum (upland cotton)
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ghi03009
]
121209546
Enzymes [BR:
ghi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
121209546
Ribosome biogenesis [BR:
ghi03009
]
Eukaryotic type
90S particles
Helicases
121209546
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
P-loop_SecA
Cas3-like_C_2
UTP25_NTPase-like
RSS_P20
Motif
Other DBs
NCBI-GeneID:
121209546
NCBI-ProteinID:
XP_040936278
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All DBs
Position
A11:123796777..123800807
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AA seq
532 aa
AA seq
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MEKIASFLFAGTSFNKKKYADEITRFKEKKETENEVDYLSSFERVNPGSEEVTASKKKRK
RKQAASEAVEGFNVFKSSKKALVISEENKTDEGEDNLSKEKKKINLKLEADSILRKQYNI
HVSGNNVASPLKSFADLSSVYGCESYLLHNFSELGFKEPTPIQRQAIPVLLSGRECFACA
PTGSGKTLAFVSPMLMKLKHASTEGVRAVILCPTRELAAQTTRECKKLAEGNKFYIKLLT
KKLIRSTDLTKLRCDILISTPLRLSSAIKKRKLDLSRVEYLVLDESDKLFELGLIKQIDS
VVKACSNPSIIRSLFSATLPDSVEELARTIMHDAVRVIIGRKNTASESVNQKLVFAGTEE
GKLLALRQSFQERLNPPVLIFVQSKERAKELYEELKFDNIRVGVIHSDLSETQRENVVND
FRAGKTWVLIATDVIARGMDFKGVNCVINYDFPDSAAAYIHRIGRSGRAGRTGEAITFYT
EDDVPFLRNIANVMAASGCEVPSWIMALRKLRWKKHRPKRESILTIPDVAEE
NT seq
1599 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaaatcgcttccttcttgttcgccggtactagcttcaacaaaaagaagtacgcc
gacgagatcacccggtttaaggagaaaaaagaaactgaaaatgaagtggattatttgagc
tcgttcgaacgtgtaaatccaggttcagaggaagttacggcttctaagaaaaaaagaaag
cgtaaacaagcagcttcagaagcggtagaaggatttaatgtctttaagagttcaaaaaaa
gcactggttataagtgaagagaacaaaacagacgagggagaagataatctttctaaagaa
aagaagaaaataaacctaaaattggaggcagattcgattttgcggaaacagtataatatt
catgtctctgggaataatgttgcgtctccactgaagagcttcgcggacttaagctcagta
tatggatgtgagtcttatttattgcacaatttttctgaacttggatttaaagagccaaca
ccaattcaacgacaggctattccggttcttctatctggtcgagaatgctttgcttgtgcc
ccaactgggtctggaaaaactttggcttttgtatcgcctatgcttatgaaactcaagcat
gcatcgactgaaggtgtgagagctgttatactgtgtcctactcgtgagctagctgctcag
acgaccagagagtgtaaaaaacttgcagaaggaaataaattttatataaaattgttgact
aaaaagctcataagaagcacggatttgacaaagctgcgttgtgatatacttatatccacg
ccacttcgcttgagttcagctatcaagaaaaggaaacttgatttgagcagggttgaatat
cttgtcctggatgagtccgacaaactgtttgagcttggcttgataaagcagattgattct
gtggttaaagcatgttctaatccttcgattatacgctcattatttagtgctactttacct
gattctgttgaggaacttgcacgcaccataatgcatgatgctgttcgcgttattattggc
agaaagaatacggcttctgaatctgttaatcaaaagttagttttcgccggaactgaagaa
gggaaactacttgcacttcggcaaagttttcaagagagattgaatcctccggttttgatc
tttgtacaaagcaaagaacgtgcaaaggaactgtatgaagagctgaaattcgataatatt
agagttggtgtcatccattcagacttatctgaaacacagcgtgaaaatgttgttaatgac
ttccgagctggcaaaacgtgggttttgatagccactgatgtcattgcccgtggtatggac
ttcaaaggtgtcaactgtgtgattaattatgattttcctgattctgctgctgcatacatt
caccgaatcggtcggtccggcagagcagggaggactggagaagctattactttctacaca
gaagatgatgttccgtttttgcgtaacatagctaatgtgatggcagcatccggctgcgag
gttccgtcctggatcatggctttgcgtaagctaaggtggaagaagcatcggcccaaaaga
gagtcgattttaaccataccagatgttgcagaagagtaa
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