Gossypium hirsutum (upland cotton): 121209647
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Entry
121209647 CDS
T04793
Name
(RefSeq) calnexin homolog 1-like isoform X1
KO
K08054
calnexin
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi04141
Protein processing in endoplasmic reticulum
ghi04145
Phagosome
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
121209647
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
121209647
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
ghi03110
]
121209647
04131 Membrane trafficking [BR:
ghi04131
]
121209647
09183 Protein families: signaling and cellular processes
04091 Lectins [BR:
ghi04091
]
121209647
Chaperones and folding catalysts [BR:
ghi03110
]
Other chaperones and cochaperones
Calnexin / calreticulin
121209647
Membrane trafficking [BR:
ghi04131
]
Endocytosis
Clathrin-mediated endocytosis
Others
121209647
Autophagy
ER-phagy
Other ER-phagy associated proteins
121209647
Lectins [BR:
ghi04091
]
L-type lectins
121209647
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Calreticulin
DUF1634
Acatn
OATP
Motif
Other DBs
NCBI-GeneID:
121209647
NCBI-ProteinID:
XP_040936572
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All DBs
Position
A11:3924120..3926947
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AA seq
537 aa
AA seq
DB search
MIMMGRFALLVFLEFASMQLLCIAADHDAAIFYDSFEEPFNGRWIVSEKDDYKGIWEHSK
SEGHDDFGLLVTEKARKYAIVKELEEPVNLRDGTTVLQYEARFQNGLECGGAYLKYLRPQ
EAGWKPKEFDNGSPYSIMFGPDICGLTNKVHFILKQKNPKSGEYVEHHLIDPPRVPSDKL
SHVYTAILKPDNEISILIDGEAKKKGNFLSAQDFDPPIIPAKTIPDPNEKKPEDWDDRVR
IPDPNAVKPDDWDENAPMEIEDMEAVKPEGWLDDEPEEIDDPEATKPEDWDDEEDGVWEA
PKIDNPKCQTAPGCGEWKRPMKRNPAFKGIWNPPLVDNPNYKGIWKPRDIPNPNYFELDK
PYFDPIAAIGIEIWTMQEGILFDNILIAKEENVAKSYRDTTWKPKFVVEKEKQKAEEEAA
GSDDLGGFQKVVFDVLYKFADIPFLSKYKLQILDFIEKGEKQPNLTIGVLVSIVVVILTA
IFMLIFSGKKQQPRVEKKTEVAADTSNDQGSSGEKPAEEEKENETGGAAPRQRRRDT
NT seq
1614 nt
NT seq
+upstream
nt +downstream
nt
atgataatgatggggcgttttgcgcttcttgtcttcttagagttcgcgtcgatgcagctt
ctctgcattgccgctgatcatgatgctgcgattttttatgattcatttgaagagccattc
aatgggcgatggatcgtctctgaaaaagatgattataaaggtatatgggagcattcaaag
agtgaagggcacgatgactttgggcttctagtgaccgagaaggcacggaagtacgcaata
gtgaaagagctggaggagcctgtgaatctcagggatggaaccactgtgcttcagtacgag
gctcgcttccagaatggacttgaatgtggtggtgcatacctgaaataccttagacctcag
gaagctgggtggaagcctaaggaatttgacaatggatccccttactctatcatgtttggc
cctgacatatgtggattaacaaacaaggtgcactttatcctgaagcagaagaatcctaaa
tctggggaatatgttgaacatcatcttattgacccaccgcgcgttccatctgacaagctt
tctcatgtctatactgccatcttgaagcctgacaatgagattagcattctgattgatgga
gaggcgaagaagaagggaaacttcctctcagctcaagattttgatcctccaattatccct
gccaagactattcctgacccaaatgaaaagaaacccgaggactgggacgatagagtcaga
attcctgatcctaatgctgtgaagcctgatgattgggatgaaaatgcacccatggaaatt
gaagatatggaggctgtgaaaccggaaggatggttagacgatgagcctgaagagatagat
gatcctgaggcaaccaagccagaagattgggatgatgaagaggatggtgtatgggaagcc
cccaaaattgacaacccaaagtgtcagacagctcctggttgtggtgaatggaagagaccg
atgaagaggaacccagcttttaaaggaatatggaatcctcctctagtcgacaaccccaat
tacaagggtatttggaagcctcgggacatcccaaaccctaactacttcgagcttgacaag
ccttactttgaccctatcgctgcaattggtatcgagatttggacaatgcaagaaggtata
ttgtttgacaatattttgatagccaaagaagagaatgttgctaagtcataccgggacacc
acatggaaaccgaagtttgtggttgagaaggaaaaacagaaggcggaggaagaagctgca
ggttcggatgatctcggtggcttccagaaggtggtcttcgatgtcctatacaagtttgct
gatattcctttcttaagcaaatataagctccaaattcttgacttcattgagaagggtgag
aaacaacccaacctcaccattggtgtcctggtctccattgtggtggttatcttgacagct
atcttcatgctcatttttagtgggaagaaacaacagccaagagtagagaagaaaacagag
gtggctgctgatacatcaaatgatcaaggaagcagtggagaaaagccagctgaagaggaa
aaggagaatgaaactggtggtgctgctccccgccaaaggaggcgtgacacttga
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