Gossypium hirsutum (upland cotton): 121209709 Help Entry 121209709         CDS       T04793                                  Name (RefSeq) vacuolar sorting protein 39-like   KO K20183   Vam6/Vps39-like protein vacuolar protein sorting-associated protein 39 Organism ghi  Gossypium hirsutum (upland cotton) Pathway ghi04148   Efferocytosis Brite KEGG Orthology (KO) [BR:ghi00001]  09140 Cellular Processes   09141 Transport and catabolism    04148 Efferocytosis     121209709  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:ghi04131]     121209709 Membrane trafficking [BR:ghi04131]  Endosome - Lysosome transport   Tethering complex    Hops complex     121209709 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Vps39_1 CNH zf-Vps39_C Clathrin zf-HC5HC2H DUF2175 Motif Other DBs NCBI-GeneID:  121209709 NCBI-ProteinID:  XP_040936825 LinkDB All DBs Position A02:107107390..107113851 Genome browser AA seq 983 aa AA seqDB search MVHNAYDSFKLINNCPTKIDAVESYGSKLLVGCSDGSLRIYGPDSSIADQSPPFDPLTLR KKPYALERTVAWFSKKALLSMKVLESRGLLLSLSESIAFHRLPNFETIVVIAKAKGANVY SWDDRRGFLCFARQKRVCIFRHDGHGFLEVKEFGVPDTVKSISWSGENICVGVRKDYMIL KATNGALSEVFSSGKIAPPLVVPLPSGELILGKENIGVLVDQNGKLVQAGRICWSEAPIA VVIQKPYAIALSPRRVEIHSLRVPYPLIQTIVLHDACHLIKSNNAIVVASNNSVYGLFPV PLGAQIVQLTASGEFEEALALCKLLPPKDADLRVARERSIHTRYAHYLFDNGCYEEAMEH FLASQVDITYVLSLYPSIVLPKTTTIPKPEKLIGLSPDDSSCLSDDLETWLPQPSDSDEN AAFEFKKTSHNTLMALIKYLQKKGYNIVEKAAAEGMEEVVLDAIGDNFTSARSKKSNKRH GNIPINSAAGHMAAILDTALLQALLLTGQPSAALELLNGLNYCDVKICEELLRNGNHYAA LVELYKSNSMHRESLKLLHQLVEESKRNQSHAEEFGPEAIIEYLKPLCGTDPMLVLEFSL FVLENHPTQTIELFLSGNIPADMVNAYLKQHAPNMQGRYLELMLAMNENRISANLQNEMV QISLSEVLEWYSELSAQQMWDEKAYSPTRKKLLSALESISGYNPEALLEHLPPDALFEER AILFGKMNQHELALSLYVHKLHVPELALAYCDRVYDSAVHRLPVKSSGNLYLTLLQIYLN PQKTTKYFENSIMNLVSSSNTSTQKVSSVASLKSKVGRKKIASIEGAEDMRISPSNTDTT IEESSEEGGSTIMFDRVLDLLSRRWDRINGAYALKILPRETKLQNLLPFLGPLVKKSSEA YRNSSVIKSLRQTESLQVKDELYNQRKATVKISRDSTCSLCDKKIGTTVFAIYPNRKTLV HFVCFRDSQNKKVVTRGSLLKKR NT seq 2952 nt NT seq  +upstreamnt  +downstreamnt atggtgcataatgcctatgattccttcaagcttattaacaattgtcccactaaaatcgac gccgtcgaatcctacggttccaagctcctcgttggctgttccgatggttcccttcgaata tacggtcctgattcctcaatcgccgaccaatctccaccgttcgatcctctcacgttacgg aaaaaaccttacgcactggagagaaccgttgcatggttttcaaagaaagctctgctttca atgaaggtattggaatcgagagggctacttttgtcgctctctgaatcaatcgcttttcat aggcttccgaattttgaaactattgttgtgatcgctaaagctaaaggcgctaatgtctac tcttgggacgatcgtagaggcttcctttgctttgctaggcaaaaaagagtttgcattttc aggcatgacggacatggattcttggaggtgaaagagtttggtgtaccagatacagtgaag tcgatatcatggtctggtgagaacatatgtgtaggtgttagaaaggactacatgatatta aaggccacgaatggcgcattgtcagaggttttctcttcggggaagatagcgccaccatta gttgttcctcttccttctggggaacttattctcgggaaggaaaatattggagtccttgtg gatcaaaatggtaagcttgttcaagctggtaggatatgttggtcagaagctcctattgct gttgttatccagaagccatatgcaatagctctgtctcccaggcgtgttgagattcactcc ctccgagttccatatcctttaatacagacgattgtcctccatgatgcttgtcatcttata aaaagtaacaatgccattgttgtagcatcaaacaattcagtttatgggcttttccctgtt cctcttggtgcacagattgtccaattaacagcatctggagaatttgaggaagcgttggct ttgtgtaagctgcttccacctaaagatgcagaccttagagttgcaagggagcgttcgatt catacaagatatgctcattatctctttgacaatggttgctatgaggaggcaatggagcac tttttggcatctcaagtggatattacttatgttctttctttgtatccatccattgttctt cccaaaacaactacaattcccaagccggagaagttgataggcctctctccggatgattca tcctgcctgtcagacgatctggaaacctggcttccacaaccatcagactctgatgagaat gcagcattcgagttcaagaaaacgagccacaatactctcatggctcttattaagtaccta caaaagaaaggatacaacattgtagagaaagctgctgccgagggaatggaagaggtagtt ttagatgccatcggggataactttacttcagctaggtctaagaagtcaaataagcggcat ggtaacattccaattaactcagctgctgggcatatggcagctatacttgatacagccctc ctccaagctctgcttcttactggacaaccatctgcagctttagaattgctgaacggtctt aactactgtgacgtaaaaatatgcgaggagcttcttcgaaatgggaatcactatgctgct ctggtagaactatacaaaagtaactcaatgcaccgtgaatctcttaaactattacatcaa ttagttgaagagtcgaaaagaaaccaatcacatgctgaggagttcggtcctgaggcaatt attgagtatctcaagcctctctgtggcaccgatccgatgcttgtgcttgagttctcgttg tttgttctcgaaaaccatccaacacaaaccattgagctatttttgtctggaaatattcca gcagacatggtcaatgcttatttgaagcagcatgctccaaacatgcagggcaggtacttg gaacttatgctcgcgatgaatgaaaataggatctcagcgaacctgcagaatgaaatggta caaatctctctctcagaagtacttgaatggtattcagagctaagtgctcaacagatgtgg gatgagaaggcttattctccgacaaggaagaaattattgtctgcattagaaagcatctcg gggtacaatcccgaggctttgttggaacatcttcctccagatgctttattcgaagagcgt gcaattttgttcggaaaaatgaaccaacatgaacttgcgctatcactatacgttcataag cttcatgtacctgaactggcactggcctattgtgatcgggtttatgactctgcagttcat cgactcccggtaaaatcctctggcaatctatacctcactcttttacagatttatctgaat cctcaaaaaacaaccaaatactttgaaaatagtattatgaatttggtatcatcctcaaat acaagcacgcaaaaggttagttcagtggcttcactgaaatctaaagtaggacgtaagaaa attgcgtcaatagaaggtgcggaggatatgcgtatcagtcctagtaacaccgataccacc atcgaagaatctagtgaggaaggaggctctactatcatgttcgatcgggtacttgatctt ttgagtcgaaggtgggatagaatcaatggagcttatgcactcaaaatcttaccgagggag actaaactacagaacttgcttccatttctgggacctcttgtaaaaaagtccagtgaagca tacaggaactcctctgtcatcaagagcttgaggcagactgagagcctacaggttaaagat gaactctacaaccaaagaaaagctactgtaaagatttcgagagatagtacgtgctctctc tgcgacaagaaaatcggaacaaccgtattcgccatctacccgaatcggaaaacattggtt cactttgtttgctttagagattcacaaaataagaaagttgtaaccagaggctcattacta aagaagcgatga

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