Gossypium hirsutum (upland cotton): 121209753
Help
Entry
121209753 CDS
T04793
Name
(RefSeq) putative indole-3-acetic acid-amido synthetase GH3.9 isoform X1
KO
K14487
auxin responsive GH3 gene family
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
121209753
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GH3
GH3_C
GH3_M
Motif
Other DBs
NCBI-GeneID:
121209753
NCBI-ProteinID:
XP_040937009
LinkDB
All DBs
Position
A11:12670334..12673833
Genome browser
AA seq
595 aa
AA seq
DB search
MDGKKLEYKGENALKEIEKLTTTAGEVQYGILKEILKRNAETEYLNKYMKGSIDVSQFKS
CVPVITYKNIYPYIQRIANGEDSFLITGQTITEILCSSGTSAGEPKLTPSIAEDLDRRTF
LYNLIMPIMNQYIPGLDDGKAMYLYFVKAELSTPCGLPFRTVLTSYYKSKHFKCRTRDPF
NDFTSPDQAILCNDSNQSMYCQLLAGLVHRHQVMRLGAVFASALLRAISFLERKWAQLCN
DIRTGHLDLSIIDPACRSAMMSILSSPNPDLADEIESICSRPSWKGILCHLWPRAKYIEA
VVTGSMAQYIPPLEYYSAGKLPLVCTMYASSECYFGVNLKPICDPAEVAFTLLPNMGYFE
FLPLGENGALAMDMDEEEAVPNDRLVDLVNVKVGCYYELVVTTFSGLYRYRIGDVLQVTG
FHNQAPQFRFICRRNVVLSVDNDKTNEEDLHRSITTAKKLLEPYNALLVEYTSYADTSSV
PGHYVLFWEIQMVDSATSIDAKLLQECCVTVEEELDYVYRQCRSREKTIGPLEIRVVEPG
TFEALMDLIISQGGSINQYKTPRCIKSSTALKLLNSHALASFSSPRDPKWIPLNG
NT seq
1788 nt
NT seq
+upstream
nt +downstream
nt
atggatgggaagaaactggaatacaagggtgaaaatgccttgaaggagattgaaaagtta
acgacgacagctggtgaagttcagtatggcatcttgaaagaaatattaaagcgaaatgca
gaaactgagtatttgaataagtatatgaaaggatctatagatgtttctcagtttaaaagt
tgtgtcccggttattacctacaagaatatatatccttatatccagagaattgctaatggt
gaagactctttcctcatcactggtcaaaccataactgaaattctgtgcagctcgggaaca
tctgctggagagcctaaattaacgccatcaatagcagaagatcttgaccgtcggaccttt
ctttataatctcatcatgccaattatgaaccagtacattcccggtcttgatgacggcaag
gccatgtatctatactttgtcaaggctgaattatctacaccttgtggtctgccatttcgc
actgtgctcaccagctactacaagagtaagcacttcaagtgccgaacacgagacccattt
aatgactttacaagcccagatcaggcaatcttgtgcaatgatagcaaccaaagcatgtac
tgccagttgcttgctggtctagtacatcgtcaccaggttatgagattaggggctgtattt
gcatcggctctcctccgagccatatcttttcttgagcgtaaatgggctcaactatgcaat
gatatccgcaccggccatcttgacctgtcgataatagaccctgcatgccggtcagcaatg
atgtctatactatcatcacctaaccccgatctggctgatgagattgagagcatctgtagc
cgtccatcttggaaaggaatcctgtgtcacctatggcccagggccaaatacatcgaggct
gtagttactggctccatggcacagtatataccacctctcgagtattacagtgcaggaaag
ttgcctttggtttgtactatgtatgcttcatccgagtgttactttggtgtcaacttgaaa
ccaatatgtgaccctgcagaagtagcatttactctcttgcctaacatgggttactttgaa
tttttacctttgggagaaaatggagcacttgccatggacatggatgaagaggaggcagtg
ccaaatgacaggcttgttgatttggtgaatgttaaagttggctgctattatgaattggtg
gttactactttctctggtctctatagatatcgaatcggagatgtgctccaggtgactgga
tttcacaaccaagccccacaattccgattcatatgcaggaggaatgttgtgcttagcgtt
gacaatgacaaaaccaacgaggaagatcttcacagaagcatcaccacagcaaagaaattg
ttagaaccctacaacgccttgcttgtggagtacaccagctatgccgatacatcctctgtc
cctggacattacgtactcttctgggaaattcaaatggtagactcagccacctccattgat
gctaagctgctacaagaatgttgtgttactgtggaagaagagctcgattatgtctacagg
caatgccgtagccgggaaaagaccataggaccacttgagatacgggttgttgagcctggg
acattcgaggcattgatggatttgatcatcagccaagggggctcaattaatcagtacaaa
acaccaaggtgcatcaagtcaagtactgctcttaagttgcttaattctcatgccttggct
tcattctctagtcctagggatcccaaatggattcccttgaatggctaa
DBGET
integrated database retrieval system
