KEGG   Gossypium hirsutum (upland cotton): 121210920
Entry
121210920         CDS       T04793                                 
Name
(RefSeq) ubiquitin-40S ribosomal protein S27a
  KO
K02977  ubiquitin-small subunit ribosomal protein S27Ae
Organism
ghi  Gossypium hirsutum (upland cotton)
Pathway
ghi03010  Ribosome
ghi04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:ghi00001]
 09120 Genetic Information Processing
  09122 Translation
   03010 Ribosome
    121210920
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    121210920
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03011 Ribosome [BR:ghi03011]
    121210920
   04121 Ubiquitin system [BR:ghi04121]
    121210920
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:ghi04147]
    121210920
Ribosome [BR:ghi03011]
 Ribosomal proteins
  Eukaryotes
   Small subunit
    121210920
  Archaea
    121210920
Ubiquitin system [BR:ghi04121]
 Ubiquitins and ubiquitin-like proteins
  Ubiquitins
   121210920
Exosome [BR:ghi04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   121210920
  Exosomal proteins of colorectal cancer cells
   121210920
SSDB
Motif
Pfam: ubiquitin Ribosomal_S27 Rad60-SLD Ubiquitin_2 Rad60-SLD_2 Dsc3_N Plexin_RBD DUF2604 UBL_UBAC1 TBK1_ULD Fer2_3 Ubiquitin_5 OTU1_UBXL
Other DBs
NCBI-GeneID: 121210920
NCBI-ProteinID: XP_040938835
UniProt: Q2QDG1
LinkDB
Position
A12:84073140..84073911
AA seq 156 aa
MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN
IQKESTLHLVLRLRGGAKKRKKKTYTKPKKIKHKKKKVKLAVLQFYKVDESGKVQRLRKE
CPNAECGAGTFMANHFDRHYCGKCGLTYVYQKAGGD
NT seq 471 nt   +upstreamnt  +downstreamnt
atgcaaatcttcgtcaaaaccctaacggggaagaccataaccctagaggttgagtcttcc
gacaccatcgacaatgtcaaagccaagatccaagacaaggaaggcatcccacccgaccaa
cagcgcctcatctttgccggaaagcagctcgaggacggccgcaccttagccgactacaac
atccagaaggaatccaccctccatctcgtgctccgtcttaggggaggtgctaagaagaga
aagaagaagacctacaccaagcccaagaagatcaagcacaagaagaagaaggtcaagctc
gctgtgctacagttctacaaggtggatgaatcgggtaaggttcagaggctgaggaaagag
tgtcctaatgctgagtgtggtgctggaactttcatggctaaccatttcgataggcactat
tgcggtaagtgtggactcacttatgtttaccagaaggctggtggagattaa

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