Gossypium hirsutum (upland cotton): 121211214
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Entry
121211214 CDS
T04793
Name
(RefSeq) 25.3 kDa vesicle transport protein-like
KO
K08517
vesicle transport protein SEC22
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi04130
SNARE interactions in vesicular transport
ghi04145
Phagosome
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
121211214
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
121211214
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ghi04131
]
121211214
Membrane trafficking [BR:
ghi04131
]
SNARE
VAMP, Ykt6, Sec22 (R)
Sec22
121211214
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Gene cluster
GFIT
Motif
Pfam:
Longin
bCoV_NS6
SelP_N
Motif
Other DBs
NCBI-GeneID:
121211214
NCBI-ProteinID:
XP_040939685
UniProt:
A0ABM2ZD88
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Position
A12:107562617..107564211
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AA seq
229 aa
AA seq
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MVKLTIVGRVKDGLPLAQEARYMNNETTTSHNLSSNYKQQAEFLLNEISKGALPLPSMTI
RVDHHSFNYLVVNGICFITLCDSSYPRKLAFNYLQDLQKEFDKFDNGLIYKITKPYSFVK
FDSIISSIRKQYIDTRTQANLSKLNANRHRELDIVTGNMSDIVERRRNSEILETPAANYT
PQSSSLLWGSPRLEAIALIWTPIAIITVIAWILLWVSLVFTDDYLISTL
NT seq
690 nt
NT seq
+upstream
nt +downstream
nt
atggtgaagctaaccattgttggaagagtgaaagatgggttaccactggcacaagaagca
aggtacatgaacaacgagacgacgacgtctcacaacttatcatctaactacaagcaacaa
gctgagttccttctcaatgaaatctccaaaggagctttaccacttccctcaatgaccatc
cgcgttgatcaccattctttcaactatttggtggtgaatggaatctgcttcatcacatta
tgcgattcttcatatccaagaaaactagctttcaattatcttcaagatttgcaaaaggag
tttgacaagtttgataatggcctcatttacaaaattactaaaccatacagctttgttaaa
ttcgatagtattatttctagtattaggaagcaatacattgatacaagaacacaggccaat
ttatcgaagctgaatgctaatcgtcatcgagaactcgatatagttaccggaaacatgtct
gatatcgtagaaagaagacgaaattcggaaatattagagacaccagcagctaattatacc
cctcagagctcttctctattatggggttctccacggcttgaggcaattgcattgatttgg
acacccattgcaatcattactgtaattgcttggattcttttatgggttagcctagttttt
acagatgactacttaatatcaactttgtag
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