Gossypium hirsutum (upland cotton): 121211304
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Entry
121211304 CDS
T04793
Name
(RefSeq) aconitate hydratase, cytoplasmic-like isoform X1
KO
K01681
aconitate hydratase [EC:
4.2.1.3
]
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi00020
Citrate cycle (TCA cycle)
ghi00630
Glyoxylate and dicarboxylate metabolism
ghi01100
Metabolic pathways
ghi01110
Biosynthesis of secondary metabolites
ghi01200
Carbon metabolism
ghi01210
2-Oxocarboxylic acid metabolism
ghi01230
Biosynthesis of amino acids
Module
ghi_M00009
Citrate cycle (TCA cycle, Krebs cycle)
ghi_M00010
Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate
ghi_M00012
Glyoxylate cycle
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
121211304
00630 Glyoxylate and dicarboxylate metabolism
121211304
Enzymes [BR:
ghi01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.3 aconitate hydratase
121211304
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Gene cluster
GFIT
Motif
Pfam:
Aconitase
Aconitase_C
HypD
Motif
Other DBs
NCBI-GeneID:
121211304
NCBI-ProteinID:
XP_040939915
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Position
A12:complement(13644789..13651327)
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AA seq
900 aa
AA seq
DB search
MASANPFNSILKTLEKPQGGEFGKYYSLPALNDPRIDKLPYSIKILLESAIRNCDEFQVK
SEDVEKIIDWENTSPKQVEIPFKPGRVLLQDFTGVPAVVDLACMRDAMNKLGGDSNKINP
LVPVDLVIDHSVQVDVARSENAVQANMELEFQRNKERFAFLKWGSNAFDNMLVVPPGSGI
VHQVNLEYLGRVVFNTNGVLYPDSVVGTDSHTTMIDGLGVAGWGVGGIEAEAAMLGQPMS
MVLPGVVGFKLLGKLRDGVTATDLVLTVTQMLRKHGVVGKFIEFYGEGMSELSLADRATI
ANMSPEYGATMGFFPVDHVTLQYLQLTGRSDETIAMIESYLRANNMFVDYNEPQIEKVYS
SYLQLKLEEVEPCISGPKRPHDRVPLKEMKADWHACLDNRVGFKGFAIPKESQDKVAKFS
FHGTPAELRHGDVVIAAITSCTNTSNPSVMLGAALVAKKACELGLEVKPWIKTSLAPGSG
VVTKYLQKSGLQRYLNQLGFHIVGYGCTTCIGNSGDIDESVASAISENDMVAAAVLSGNR
NFEGRVHPLTRANYLASPPLVVAYALAGTVDIDFEAAPIGTGKDGKKIFFRDIWPSSEEV
ANVVQSSVLPDMFKATYEAITKGNPMWNQLSVPSGSLYAWSPTSTYIHEPPYFKDMTMSP
PGPHGVKDAYCLLNFGDSITTDHISPAGSIHKDSPAAKFLLEHGVDRRDFNSYGSRRGND
EIMARGTFANIRLVNKLLKGEVGPKTIHIPTGEKLSVYDAAMRYKTAGQDTIILAGAEYG
SGSSRDWAAKGPMLLGVKAVIAKSFERIHRSNLVGMGIIPLCFKSGEDADTLGLTGHERY
TIDLPSCVSEIRPGQDVTVATDSGRSFTCTVRFDTEVELAYFNHGGILQYVIRNLIGSKQ
NT seq
2703 nt
NT seq
+upstream
nt +downstream
nt
atggcttcagcaaatcctttcaattccattttgaagactttggagaagccacagggtggt
gaattcggcaaatactattctttacctgctctcaatgatccaaggatcgataaacttcct
tactctattaaaatacttcttgaatccgcaatccgtaactgcgatgagtttcaagttaag
agtgaggatgttgagaagatcattgactgggagaacacatctcccaaacaagttgagatt
ccgtttaagccaggtcgagtgcttcttcaggattttactggtgttcctgctgttgttgat
ctcgcctgcatgcgagatgctatgaacaagcttggtggtgattctaataaaataaatccc
ttggttcctgtagatcttgttattgatcattcagttcaggttgatgtggcaagatcggaa
aatgcagtgcaagcaaacatggaacttgaattccaacggaacaaagaaagatttgctttc
ctcaagtggggttctaatgcatttgataacatgcttgttgtcccccccggatcaggaatc
gtacatcaggtcaatttagagtatcttggaagagtcgttttcaacacaaatggcgtgctt
taccctgatagcgttgttggaacagattctcatacaactatgattgatggtttgggtgtt
gctggctggggagttggtggtatagaagctgaagccgccatgctcggccagcccatgagc
atggtcttgccaggtgttgttgggtttaaactattaggaaagttgagggatggtgtgaca
gctaccgatttggtgttgacagttactcaaatgctgaggaagcatggggttgttggcaag
tttatcgaattctatggggaaggcatgagtgaattgtcattagcagaccgtgcaactatt
gccaacatgtctcctgagtatggtgcaaccatggggtttttccctgtggatcatgtcacc
ctgcaatatctgcaattgactggcaggagtgatgagactattgcaatgatagaatcttat
ttacgggccaataacatgtttgtggactacaatgagcctcagattgagaaagtgtactct
tcctacctgcaattgaaacttgaggaagttgaaccatgtatatcagggcccaagaggcct
catgatcgagttcctctgaaagaaatgaaagcagattggcatgcatgcttagacaacagg
gttggatttaagggatttgctataccaaaggaatctcaggataaggttgcaaagttttca
tttcatgggactccagcagaattgaggcatggagatgtggttatagctgctattactagt
tgcacaaatacttcaaatcctagtgtgatgcttggagctgctctggtagcaaagaaggcc
tgtgaattaggattggaggtcaagccatggatcaagacaagtttggctccaggttctggg
gttgtaaccaaatacttgcagaagagcggcttgcagaggtatttgaatcagttagggttt
catatagttggatatggatgcactacatgtattgggaattccggagatattgatgaatct
gtggcatccgctatctctgaaaatgatatggttgctgcagctgtgttgtcaggaaacaga
aactttgaaggacgtgtacaccctttgacaagggctaactatcttgcttctcctcctctt
gttgttgcctatgctcttgctggcactgtagatattgattttgaggcagcacccattggt
acagggaaagatggaaaaaagatctttttcagggatatttggccttctagtgaagaagtg
gctaatgttgttcaatcaagtgtgctgcctgatatgtttaaagctacatatgaagcaatc
accaaaggaaatcccatgtggaatcagttatctgtaccctctggtagcctttatgcgtgg
agcccaacatcaacttacatccatgagccaccctactttaaggacatgaccatgtcacct
ccaggtccacatggagtgaaggatgcctactgcttgcttaactttggagatagtatcaca
actgatcacatctcccctgctggtagcatccacaaagatagccctgcagccaaatttcta
ctggagcatggggtagatagaagagatttcaactcttatggaagtcggcgtggtaatgat
gaaattatggccaggggtacttttgcaaatatccgacttgtgaacaaactattgaaagga
gaagttgggcctaaaacaattcatatccccactggagagaaactatctgtgtatgatgct
gccatgaggtacaagactgcaggacaggataccataattttggcaggtgctgaatatggg
agtggaagttctcgagactgggctgcaaaaggtccaatgttattgggtgtaaaagcagtc
attgccaagagttttgagcgaattcaccgtagtaatttggtgggcatgggcatcattccc
ctatgtttcaagtctggagaggatgctgacactcttggattgactggccatgagcgctac
acaattgatcttccaagctgtgtgagcgaaattcgacctggccaagacgtcacagtggct
acagacagtggcaggtcattcacctgcactgtacgatttgatacagaggtggaactggca
tatttcaaccacggaggcattctgcagtatgtcatcaggaacttgatcggctcaaaacag
tga
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