KEGG   Gossypium hirsutum (upland cotton): 121212588
Entry
121212588         CDS       T04793                                 
Name
(RefSeq) uncharacterized protein LOC121212588
  KO
K11138  telomere-associated protein RIF1
Organism
ghi  Gossypium hirsutum (upland cotton)
Brite
KEGG Orthology (KO) [BR:ghi00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:ghi03032]
    121212588
DNA replication proteins [BR:ghi03032]
 Eukaryotic type
  DNA Replication Termination Factors
   Other termination factors
    121212588
SSDB
Motif
Pfam: Rif1_N Adaptin_N
Other DBs
NCBI-GeneID: 121212588
NCBI-ProteinID: XP_040941610
LinkDB
Position
A13:107812162..107818734
AA seq 1119 aa
MSSIISNQIEEIKIFISSNSKTDQSLGYSTLLHFQEQSSDSPPSIQALIQSSRCLINSIV
SDIHNEDEEIAAQALKCLGFMIYHPSLVATIPAEDGKRVLESLAKLITFTKMKSVCNLGV
WCISIQQFDATLLAACFDTLLQAVVHALDNPIGSLSTTFEAMQAVAKLAAQMSEMMRESS
HLWVPPIYRRLLSIDKRERDMSERCLLKIRPTILPPSISLSKAIIEDMREKLLTGMKDWL
DKGMKVQTVQAWGWFICFLGSGALKNRHLVNDMLKVLEQTFSDHNPQVQIASLVAWQGLI
DALVHPQILSCKKNRIQQLQTSPGKSSELVLNGFSKSLKLAVAPLIGIISSKCDVSVLLS
CLNTWCYLLHKLDIFVNSPSVINVVLDPMFQAIFKIGPDSKSIRLWNFCLDLLEDCISTK
CSDLNSDPKNQVNLHLSARTFIPGSGRYSWNQYPIKWLPWDLSQLDFYLKMISIIITHVA
TATAAPESKKSVCDAAVRIFRFVLKGVQMEFRNPSNNYDNIMFCLNTILSFMKKLGEDAS
SDGGGDLFNTSLYLIEATMEELEPSIMESPLYKVALDISYVGSLDSVKHSKIPHRCSFMD
MFSPMVYLTVLYLGLVVQLTLNTPEMELILQRLQRFYKFVLSSDDPLESFLASVGFLYAH
MGFKYMEIWMVMVTCLNGCIDGMKDLSLFKTDSDNSFHRAICHLLSYPFILFSCAKKDIT
LLRASNSPKESFVLSERKLEQAIEVWKSLYGSVCVACLKSSATNTFSHDLCAMLNSCFGG
NGSMFQYNSELGYKDLELACLSFSGKVLVCILEQKLASDTIGREFVGVCNESSGINNIFV
FASRVMKFMYVNMGREPASGLVSSRVFSTLTCFISCLHSKQDILSFFEIISGPLLQWLSH
QEIKDENAKDQLGILWAESLNCLQRSQPLLTFDSSFLGLQASLLEKTLDHPNTSVSDPTI
IFWNSTYGKQISLEYPQNLLHVLHRLSRNGRISLYNRSKSFVARCSTLEHDTVTTPWCCK
ITPTQKSSKRVELTEEGMIPGSNQNNKPPSNSKRKRVELTEHQKEVRRAQQGRERDCNGH
GPGVRTYTNLDFSQGNQESQDSQGIQDSEAMLEMLRRVG
NT seq 3360 nt   +upstreamnt  +downstreamnt
atgtcgagtatcatcagcaatcagattgaagaaatcaaaatttttatatcatctaattca
aaaacagaccaatcgttaggttattcaactcttttacacttccaagaacagtccagtgac
agtcctccttcaatccaagccctaattcaaagttctcgatgtcttattaattcaatcgtc
tccgatatccataatgaagatgaagaaatagctgctcaagctttgaagtgcttgggattt
atgatctatcacccttctctcgttgctacaattcctgctgaagatggtaaacgagtttta
gagtcattggctaaactcatcacgtttacaaaaatgaagtcagtttgcaacttaggcgtg
tggtgtatatcgatacaacaattcgatgcgacacttttagctgcctgctttgatacattg
ttgcaggcggttgttcatgcccttgacaatcctattggttcattgtcaacaacgttcgag
gccatgcaggctgtggcaaagttagcggcccaaatgagtgaaatgatgcgggaatcatca
cacttatgggttcctcctatatatagaagacttctcagcattgataagagagagcgggat
atgtctgagaggtgtcttttgaaaattaggcctacaatacttcctccttcaataagtctt
tccaaggctattattgaagacatgagggaaaaattgctgacagggatgaaggactggtta
gacaagggtatgaaggttcaaactgtccaggcgtgggggtggttcatctgcttcctagga
tctggtgccttgaagaatagacatctggtgaacgatatgttgaaagttcttgagcaaaca
ttttcagatcacaacccacaagtccagattgcgtctctggttgcttggcaaggtcttatt
gatgccctggttcatcctcaaatactgtcttgcaagaagaacagaattcaacaattgcaa
acgtcaccaggaaaaagtagtgaactggtgttaaatggattttcaaaaagcttaaagctc
gctgtggcacctctaatagggatcatttcaagtaaatgtgacgtttctgttctcttgtcc
tgcctaaacacatggtgttatcttctacataaacttgatatcttcgtcaactctccgtca
gtaattaacgtggtactggatcctatgtttcaagcaatttttaagataggaccagatagt
aaaagtattcggttatggaatttctgccttgatttgcttgaagattgtatatcaacaaag
tgttcagatttgaactctgatccaaagaaccaggtaaaccttcatctttctgctagaacc
ttcattcctgggtctggcaggtattcatggaatcaatatcctattaaatggttgccttgg
gatcttagtcagttggatttctacttaaagatgattagtattattattactcatgtggca
acagcaacagctgcccctgaaagtaaaaaatcagtgtgtgatgcagctgtcaggatattt
agatttgttttaaagggtgtgcaaatggagtttagaaatccatcaaataattatgataac
attatgttctgtttgaacacgatattaagtttcatgaagaaattaggcgaagatgctagt
tcagatggtggtggtgacttatttaatacttccctttatttaatagaggccaccatggag
gagttagaaccgtctattatggaatcccctctttacaaggtggctttagacatcagttat
gttggcagtctggattcagttaaacattcaaaaataccgcatcgatgttcttttatggat
atgttttcacctatggtctatctaactgtactctaccttggtttggtggttcaattaact
ctaaatacacctgagatggaattgattttacagaggcttcaaagattttataagtttgta
ctgtcttctgatgatcccctggaaagttttcttgcttctgttggttttttgtatgcgcac
atgggttttaagtacatggagatatggatggtgatggtgacatgtctgaatggctgtatt
gatggtatgaaggatctctctctattcaaaacagattctgacaattcgtttcatagggcc
atatgccatctcttatcatatccattcattttgttctcttgtgctaagaaagatataacc
ctgttgagagctagcaattccccgaaagaatcttttgttttatcagagagaaaacttgaa
caggctattgaggtttggaagtccttatatggttctgtttgtgttgcatgcttgaagtct
tctgctacaaacactttcagtcatgatctgtgtgcaatgttaaattcatgtttcggtgga
aacggtagcatgtttcagtataatagtgagcttggttacaaggatctggagcttgcttgc
ctttctttctctggcaaggttttggtatgtattttggaacagaaactggcttcagataca
atcggcagagaatttgttggcgtctgcaatgaatccagtggcattaataatattttcgta
tttgcttccagagtcatgaaattcatgtatgtaaacatgggaagggaaccagcctctggt
cttgtgagttcaagggtattctctacgttgacatgcttcattagttgccttcactcgaag
caagatattctttcattttttgagataatatccggtccgctgcttcaatggttatcacat
caagagataaaggatgaaaatgccaaagatcaactcggaatcctatgggctgagagcctc
aattgtttacagaggagtcagccactgctaactttcgattcttctttcctcggacttcaa
gcatccctcctcgagaaaacactggatcatccgaatacctccgtttctgatccgaccata
atcttttggaactccacatatggcaagcaaatcagcttggaatacccccaaaatctactt
catgttctacacaggttgtcaagaaatggaagaataagcctctacaatagaagcaaatca
tttgtggcaagatgctctacgctagaacatgacaccgtcaccaccccatggtgttgcaag
atcaccccaacacagaagagctctaaacgagtcgagttaacagaggagggtatgattccc
ggatctaaccaaaacaataagccaccatcaaattcaaaacgaaagagagtggaactaaca
gagcatcaaaaggaagtaagacgagcgcagcaaggaagggagagggactgcaatggacac
ggtcctggggtccgaacttatacgaatctcgacttttcgcagggaaaccaagagtcgcaa
gacagtcagggcattcaagattcggaagccatgttggagatgttgagaagagttggatga

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