Gossypium hirsutum (upland cotton): 121212733
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Entry
121212733 CDS
T04793
Name
(RefSeq) protein argonaute 7-like isoform X1
KO
K11593
eukaryotic translation initiation factor 2C
Organism
ghi
Gossypium hirsutum (upland cotton)
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ghi03019
]
121212733
03036 Chromosome and associated proteins [BR:
ghi03036
]
121212733
Messenger RNA biogenesis [BR:
ghi03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
121212733
Chromosome and associated proteins [BR:
ghi03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
121212733
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
121212733
microRNA pathway
RISC loading complex
121212733
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Piwi
ArgoN
PAZ
ArgoL1
ArgoL2
ArgoMid
TBCC_N
DUF3734
ASH2L-like_WH
DUF7497
Motif
Other DBs
NCBI-GeneID:
121212733
NCBI-ProteinID:
XP_040942055
LinkDB
All DBs
Position
A13:24064191..24068045
Genome browser
AA seq
1096 aa
AA seq
DB search
MLFDTELYKCQIGFYPFFALLLFTFFSNPNPWLAPFLSLNFITTIIIIIIIIKNLKNPLS
LSLSLSLCEFQSVAFFCVAFFFSSFINQAMEKSEEHDGSKECSGKTRAFKGINNSPHKHH
YYHHHHPWLQYSGHYGFFNQNQFQSYSYYPSLLPLPPPIPLQLALPPPLPQNHTFQPKTH
LQQLSISNTKFPVPSMTPAAQEGLQWRKSLPSKASDGIKMRNATKEALVAARRPDSGGVE
GPVISLLANHFLVKFDPSLKVYHYNVEISPNPSKEVARMIKQKLVESNSGLLCGAHPAYD
GRKNFYSPVEFQNGKLEFFVSLPIPTANTGSPFGEWNGFQQKQNQLKVFRINIRAVSNFD
GKDLSSYLSNESDDWIPLPQDYLHALDVVLRESPMEKCICVGRSFYSSSTGGTKEIGGGA
IGWRGFFQSLRPTQQGLALNVDSSITVFHESIGVIPYLQKRIDFLRDLTQRKTRSLSDDE
RKEVEKALRNIRVFVCHRETVQRYRVYGLTEEATENLYFADRDGKNLKLIGYFKDHYNYN
IQFRNLPCLQISRSKPCYLPMELCMICEGQKFLGKLSDDQTARILKMGCQRPKERKAMID
GIVRGPAGPTSGNQAEEFKLHVSKEMSRLNGRILQPPKLKLGDGGHVRDITPSRRDRQWN
LLNSHVFQGTRIERWALLSFGGTQEQKSNLPKFINQLSQRCEQLGIFLSKSTVVSPQFEP
TQVLNNVTLLESKLKKIHRAASNNLQLLICIMEKKHKGYADLKRIAETSVGVVSQCCLYP
NLGKLSSQFLANLALKINAKVGGSTVALYNSLPSQIPRLFRLDEPVIFIGADVTHPHPLD
DSSPSVAGVVGSMNWPAANKYVSRMRSQTHRQEIIQDLAAMVEELLDDFYQEVNKLPKRI
IFFRDGVSETQFYKVLKEELQAVKEACARFPGYKPPITFAVVQKRHHTWLFPFEINPSSN
QNQHFDENIPPGTVVDTVITHPREFDFYLCSHWGVKGTSRPTHYHVLWDENRFTSDELQK
LVYNLCYTFARCTKPVSLVPPAYYAHLAAYRGRLYLERSESVAFTRSSNIISRVTPPKTT
PLPKLSENVKKLMFYC
NT seq
3291 nt
NT seq
+upstream
nt +downstream
nt
atgctctttgacacagagctgtacaaatgccaaataggcttttaccctttctttgctctg
cttcttttcactttcttttctaatccaaacccctggttggccccttttctgtctttgaat
ttcatcaccaccatcatcatcatcatcatcatcatcaaaaacttaaaaaacccattgtct
ctctctctctctctctctctctgtgaatttcaaagtgttgcctttttttgtgttgccttt
tttttttcttctttcataaaccaagcaatggagaaatcagaggagcacgatggcagcaag
gaatgcagtggtaaaaccagggctttcaagggcataaacaacagccctcataagcatcat
tactaccaccaccaccatccatggttgcaatactcaggtcactatggcttctttaaccaa
aaccagttccaaagctactcttactatccttctttgcttcctttacctcctccaatacct
ttgcaactggctttacctccacctctcccgcagaatcatacctttcaaccaaaaacccat
ttgcagcaactttcaatctctaataccaaattcccagttccttctatgacaccagcagct
caagaggggcttcaatggagaaaaagtttgccatctaaagcaagtgatggaataaagatg
aggaatgctacaaaggaagcactggtggctgcaaggagaccagattctggtggtgtagaa
gggcctgtaatctctctccttgccaaccatttcctagtaaaatttgatccttctctaaaa
gtttaccattataatgttgagatatcccctaatccctccaaggaggttgctaggatgatc
aagcagaaactggttgaaagcaactcaggtttgctttgtggtgctcatccagcctatgat
ggtaggaagaatttttatagccccgttgaattccaaaatggtaagcttgagttctttgtt
agtctcccgatccccactgcgaatacaggttcgcctttcggggaatggaatggctttcaa
caaaaacagaatcagctcaaagtgtttagaatcaatatcagggctgtttccaattttgat
ggaaaggatttgagtagttacttgagcaatgaaagtgatgattggatcccacttcctcaa
gattatctccatgctttggatgttgttcttagggagagtccaatggagaaatgtatatgt
gtagggaggtcattttattcaagttccacgggaggtactaaggaaataggaggaggagct
attggatggagaggtttctttcagagtcttcgaccgacgcaacaaggactcgctctcaat
gttgattcctcgatcaccgtcttccatgagagtatcggagtaatcccttacttgcagaag
cggatcgactttcttcgagaccttactcaaaggaagacaaggagtttaagtgatgatgaa
aggaaggaagtggagaaagcattgagaaatatcagggtctttgtttgccatagagaaaca
gtccaaagatatagagtttatggcttaactgaagaagccactgaaaacctttactttgca
gatagggatggaaagaatttgaagcttattggttactttaaagatcactacaattataat
atacaattcaggaatttgccatgcttgcagatcagtaggagcaaaccatgctatcttcca
atggagctttgtatgatttgtgaaggccagaaatttctggggaagctttctgatgatcag
actgcaaggattcttaaaatgggttgccaaagaccaaaagaacgaaaagccatgattgat
ggaatcgtgaggggacctgcagggcctacaagtggcaaccaagctgaagaattcaagctc
catgtttcgaaagaaatgagtcggttgaatgggaggattcttcaacctcctaagcttaag
ctcggtgatggtggacacgtaagagatattactccttcccgccgtgaccggcagtggaac
cttctcaacagccatgtctttcagggaacacggattgaacgttgggcacttttaagtttt
gggggcactcaagaacaaaagtctaaccttcctaaattcataaaccagctatctcaaagg
tgtgagcagcttggtatcttccttagcaaaagcacagttgttagcccccaatttgaacca
acacaggtgcttaataatgtgacacttctggaatctaagctcaagaaaattcatagagct
gcctcaaacaatctccaactgctcatatgtataatggagaaaaagcacaaagggtacgct
gatttgaaacgaatagccgagacaagtgtaggagttgtgagccagtgctgcttatacccg
aacctcgggaaattgagttcacaatttctggcaaatttagcccttaagattaatgccaaa
gttggaggttccactgttgctttgtacaattcattaccttctcagattccacgacttttc
aggcttgatgagcctgtgatctttatcggtgctgacgtgactcatcctcacccgcttgat
gattccagcccatcagttgctggtgtggttggtagcatgaactggcctgcagcaaacaag
tatgtatcgaggatgagatcacaaacacatcggcaagaaatcattcaggatcttgctgca
atggtagaagaactactggatgacttctaccaagaagtaaacaaactcccgaagagaata
atcttcttccgagacggtgtaagtgaaactcaattctataaggtgcttaaagaggaacta
caagctgtcaaagaagcttgtgcaagatttccaggctacaaacctcccattacttttgct
gtagttcaaaagaggcaccatacctggttgttcccatttgaaatcaatccttcttccaat
caaaaccaacatttcgatgaaaatattcccccggggacggtagtggatacagtgataact
catccgagggaattcgatttctatctttgcagtcattggggggtaaagggtactagccgc
cccacccattaccacgtattgtgggacgaaaaccgattcacttctgatgaactgcagaag
ctggtttacaatctatgctacacttttgcaaggtgcaccaagccagtttcattggtccct
cctgcttactatgctcacttggctgcatacagaggcagactttaccttgagcggtcagaa
tccgtagcttttacgagaagttcaaacataatctctcgcgtaactcctccaaagacaacg
cctctaccaaaacttagcgagaatgttaagaagctcatgttttactgctaa
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