Gossypium hirsutum (upland cotton): 121213804
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Entry
121213804 CDS
T04793
Name
(RefSeq) cyclic nucleotide-gated ion channel 4-like
KO
K05391
cyclic nucleotide gated channel, plant
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
121213804
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ghi04040
]
121213804
Ion channels [BR:
ghi04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
121213804
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Motif
Pfam:
cNMP_binding
Ion_trans
IQ
Motif
Other DBs
NCBI-GeneID:
121213804
NCBI-ProteinID:
XP_040942868
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Position
D01:8127743..8135373
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AA seq
709 aa
AA seq
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MASEHEFYPSRATPMQYFTDEDEGEEGGGEIEEESTDDEVCKEEEKENSSDWRSLYLMCG
GRRGGGRRRKTWSLGQVFFDPKAKWVQEWNRVFLLVCATGLFVDPLFFYALSISNTCMCL
FVDGWFAITVTALRCMTDALHVWNMCLQLKMIKRSSSSYGLGNEKRSGSESEGEGGDGGE
GSSNRPRAANGRHVAFQCLKAKKGLFFDLLVILPLPQIVLWAAIPSLLEKGSVTLVMTVF
LIIFLFQYLPKIYHSVCLLRRMQNLSGYIFGTVWWGIALNLIAYFVASHAAGACWYLLGI
QRSAKCLKEQCRGIENCDLRLLACKDPIYYGTRSMVRDRARLVWAENRQARSACIDSPDS
YDYGAYKWTVQLVTNDSRLEKILFPIFWGLMTLSTFGNLESTTEWLEVVFNIIVLTSGLL
LVTMLIGNIKVFLHATTSKKQAMQLKMRNIEWWMRKRRLPSGFKQRVRNYERQRWAAMRG
VDECQMIRNLPEGLRRDIKYHLCLDLVRQVPLFQHMDDLVLENICDRVKSLIFTKGETIT
REGDPVQRMLFVVRGHLQSSQVLRDGVKSCCMLGPGNFSGDELLSWCLRRPFIERLPPST
STLVTLETTEAFGLDAEDVKYVTQHFRYTFVNERVKRSARYYSPGWRTWAAVAIQLAWRR
YKHRLTLTSLSFIRPRRPLSRSNSLGEDRLRLYTAMLTSPKPNQDDFDF
NT seq
2130 nt
NT seq
+upstream
nt +downstream
nt
atggcaagtgaacatgaattttatccttcacgtgcaacgcccatgcaatactttacggat
gaagacgaaggagaagaaggaggaggagaaatagaagaagaatcgacggacgacgaagtt
tgcaaagaagaagagaaagagaattcaagtgactggaggagtttgtatttgatgtgcggc
ggtcgccgcggcggtgggcgtcgccgtaaaacttggtcactggggcaagtttttttcgac
ccgaaggccaaatgggttcaagaatggaatagggttttcctcctggtatgcgcgacggga
ctgttcgtggacccattgttcttttacgccctgtccattagcaacacgtgcatgtgcctc
ttcgtcgacgggtggttcgccatcaccgtgacggcgctccggtgcatgacggacgcgttg
cacgtgtggaacatgtgcctccagctcaaaatgatcaagagatcatcgtcgtcgtacggt
ctcggcaatgagaagaggagtgggagtgagagtgaaggcgaagggggtgacggcggagaa
ggaagcagcaacagaccccgtgctgcgaatggccgccacgtggccttccaatgcttgaaa
gccaaaaagggactcttctttgacctattggtaattctccctctgccacagattgtacta
tgggcggcaattccatcattattggaaaaaggatcggtaacgctagtaatgacggtgttc
ttgatcatcttcctcttccaatacctccccaagatctaccactccgtttgccttttacgt
cgaatgcagaacctttccggctacattttcggcactgtttggtgggggattgctctcaat
ttgattgcttatttcgtcgcctcacacgcggcgggggcgtgttggtacttgttagggatt
caaagatcggctaagtgcttgaaagagcaatgtagagggatagagaattgtgacctgaga
ttattggcttgcaaagacccaatttactatggaacaagaagtatggtaagggatagagca
aggttggtttgggcagaaaacaggcaagcaaggagtgcttgcattgatagccctgatagc
tatgattatggagcttataaatggaccgttcagctcgttaccaacgatagtcgtctcgag
aaaatactttttcctatcttttggggtcttatgactctcagcacatttgggaacttggag
agcacaacagaatggctggaggttgttttcaacatcattgttcttactagtggacttctt
ctagtcacaatgttgattggtaacatcaaggtgtttttgcatgcaacaacgtccaagaaa
caagcaatgcaattgaagatgaggaacatagagtggtggatgaggaagaggcgcctgcct
tctgggttcaagcaaagggtccgcaactacgagcggcaacggtgggcggccatgcgtggt
gtcgatgaatgccagatgatcagaaacctccccgaggggctccggagagatatcaagtac
catctttgcctggatttagttagacaggtaccattgtttcaacacatggatgatttggtc
ctagaaaacatttgtgatcgtgtcaaatctctaattttcaccaaaggagaaactataaca
agagaaggtgacccagtacaaagaatgctatttgtagtaaggggacatctccaaagcagc
caagttcttagagatggtgtgaaaagttgctgcatgttagggcccggaaatttcagtggc
gatgagctcttgtcatggtgtcttcgaagacccttcattgagaggctcccaccatcgact
tccaccctcgtaacgctagaaactaccgaggcatttggtctcgatgctgaggatgtcaaa
tacgtcacacaacatttccgttacacattcgttaacgaaagggtcaagaggagtgctcgg
tattattctccgggatggcggacttgggctgcagtggcaattcaattggcttggaggcgg
tacaaacaccgtttaacccttacgtcattgtcattcattaggcctcggaggccgttgtcg
agaagtaattcattgggggaggacagactcaggctttatacagctatgttaacttcacca
aaaccaaatcaagatgatttcgatttttga
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