Gossypium hirsutum (upland cotton): 121214605
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Entry
121214605 CDS
T04793
Name
(RefSeq) protein PIGMENT DEFECTIVE 338, chloroplastic-like
KO
K02945
small subunit ribosomal protein S1
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi03010
Ribosome
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
121214605
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
ghi03011
]
121214605
Ribosome [BR:
ghi03011
]
Ribosomal proteins
Mitochondria/ Chloroplast
Small subunit
121214605
Bacteria
121214605
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
S1
S1_RRP5
S1_RRP4
DUF7964
Motif
Other DBs
NCBI-GeneID:
121214605
NCBI-ProteinID:
XP_040944337
UniProt:
A0ABM2ZR79
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All DBs
Position
D02:complement(9822915..9828955)
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AA seq
550 aa
AA seq
DB search
MSRVSKTLLTEREITKENRRKQREKESSRGASRIRRMQTLLQPCKSLSFLNFSSQYFAFN
GAPKWQYSVKRTCYSITAAGTPKALSFSRKYMFLRSTQIVLCSQNDTFDEFSSTQFPERF
ENDSGIEENEELELLNKPSPAPVNNGFVSDVDKESEKPDKEEVLEPFLKFFRPSEPLEVE
EGGELEDSEEKIDEVKKVGVEYYEPKPGDLVVGVVVSGNENKLDVNVGADMLGTMLTKDV
LPLYDKEMDYLVCDLENKAEEFMVYGKMGIVKDDDAMSGGPGPGRPVVETGTVLFAEVLG
RTLSGRPLLSTRQLFRRIAWHRVRQIKHLNEPIEVKFTEWNTGGLLTRIEGLRAFLPKAE
LMKRVNNFSELKGYVGRRMHVKVTRINEANNDLILSEREAWEMMHLRDGTLVEGTVVKIL
PYGAQVRIADSNRSGLLHISNMSKSRITSVAELLKEDEKVKVLVVKSLFPDKISLSTAEL
ESEPGLFILNKERVFSEAEEMAKKYRQSLPAVSAPRNTEPLPADALSFENEESLYANWKW
FKFERENESS
NT seq
1653 nt
NT seq
+upstream
nt +downstream
nt
atgtcccgagtatccaaaactttgctgacagagagagaaattacaaaggaaaatcgaaga
aaacagagagagaaagagagctcacgaggtgcaagcaggataaggaggatgcaaaccctg
cttcaaccctgtaagtccttatcctttctcaatttttcgagtcaatactttgcttttaat
ggtgcccccaaatggcagtactctgttaaaagaacttgttactccattaccgctgctggg
acaccaaaagctttgtctttttcaaggaaatatatgtttttgagaagtacccagattgtg
ctttgctctcaaaatgatacttttgatgagttttcaagcacccagtttcctgaaaggttt
gaaaacgatagtggaattgaagaaaatgaggaacttgaattgcttaataagcctagtcca
gcacctgtgaataatgggtttgtatctgatgttgataaagagtctgaaaaacctgataaa
gaagaggttttagagccttttttgaaattctttaggcctagcgaaccattggaagtagaa
gagggaggtgaattagaagattctgaggagaaaattgatgaagtgaagaaggttggtgtc
gagtactatgagccaaaacctggtgacttagtggttggtgttgttgtttctggtaatgag
aataagctggatgtgaatgttggggctgacatgttgggtacaatgttgactaaagatgtg
ttgcctttgtatgataaagagatggattatttggtgtgtgatctggaaaataaagctgag
gaatttatggtttatgggaagatgggaattgttaaggatgatgatgcgatgagcgggggg
ccgggtcctggaagaccagtggttgagactggaactgtgctttttgctgaggttcttgga
agaacgcttagtggtcggcctttgctctcaactagacagcttttcaggaggatagcttgg
catcgagtgaggcagataaaacacctgaatgaacctatagaggttaaatttacagagtgg
aatacaggtggcctgctgacaagaattgagggtttgcgagctttccttccaaaagctgag
ttgatgaagagagtaaataacttctctgagttgaaaggatatgtgggccgcagaatgcat
gtgaaagttactcggataaatgaggctaacaatgatttaatattgagcgagagggaagct
tgggaaatgatgcatcttcgagatggaacacttgtagaaggaaccgttgtaaaaatttta
ccgtatggagcccaagtaagaatagcggattccaatagaagtgggttgcttcatatctca
aatatgagcaagagtcgaattacgtctgttgctgaattgcttaaagaggatgagaaggtc
aaggttcttgttgtgaagtcactctttcctgacaaaatatctctcagtactgctgaactt
gaaagtgaacctggcctctttatattaaacaaagagagggtattttctgaggctgaagag
atggcaaagaagtacaggcaaagtctacctgcagtttctgcaccccggaataccgaacct
cttccagctgatgctttatcttttgagaatgaagaaagtctgtatgcaaattggaagtgg
ttcaagtttgaaagagagaatgaatcaagttga
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