Gossypium hirsutum (upland cotton): 121214606
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Entry
121214606 CDS
T04793
Name
(RefSeq) polypyrimidine tract-binding protein homolog 3-like
KO
K14948
polypyrimidine tract-binding protein 2
Organism
ghi
Gossypium hirsutum (upland cotton)
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ghi03041
]
121214606
Spliceosome [BR:
ghi03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
121214606
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_5
RRM_1
RRM_8
RRM_occluded
RL
RRM_3
TGF_beta
Phage_tail_terminator_5
Motif
Other DBs
NCBI-GeneID:
121214606
NCBI-ProteinID:
XP_040944346
UniProt:
A0ABM2ZPU9
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Position
D02:complement(10065412..10071694)
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AA seq
438 aa
AA seq
DB search
MAEASKVIHVRNVGHEISENDLLQLFQPFGVITKLVMLRAKNQALLQMQDIPSAINAMQF
YTNVQPTIRGRNVYVQFSSHQELTTMDQNAQGRGDEPNRILLVTIHHMLYPITVEVLHQV
FSPHGFVEKIVTFQKSAGFQALIQYQGRQNAISARTSLQGRNIYDGCCQLDIQFSNLDEL
QVHYNNERSRDFTNPNLPTEQKGRSSQHPGYGDAGVGFPQMANAAAIAAAFGGGLPPGIS
GTNDRCTVLVSNLNPDRIDEDKLFNLFSLYGNIVRIKLLHNKPDHALVQMGDGFQAELAV
HFLKGAMLFGKRLEVNFSKHPNITQGTDTHEYVNSNLNRFNRNAAKNYRYCCSPTKMVHL
STLPQDVTEEEIVNHLAQHGTIVNTKLFEMNGKKQALVMFETEEQATEALVSKHATSLGG
SIIRISFSQLQTIRENSQ
NT seq
1317 nt
NT seq
+upstream
nt +downstream
nt
atggcggaagcttctaaagtcattcatgttcgcaacgttggccatgaaatttctgaaaat
gatttgcttcaacttttccagccatttggagtgataacaaagcttgtaatgctccgtgca
aagaatcaggctcttctccaaatgcaagatattccttcagccatcaatgcaatgcagttc
tacactaatgttcaaccaactatcagggggaggaatgtgtatgttcaattctcatcacat
caagaactgacaaccatggatcagaatgctcaaggacgaggtgatgagccgaatcgaatc
ctcctggtcacaatccatcatatgctttatcctattactgtggaggtgctacaccaggtt
ttctcacctcatggatttgtggagaagatcgtcacatttcagaagtcggctggctttcaa
gccctgatccagtatcaaggacgccagaatgctatctcagctagaacttctcttcagggc
cgtaatatttatgatggctgctgccagcttgatatacagttttcaaaccttgatgaatta
caagtccattataataatgagcgatcaagggatttcacaaacccaaatctcccaacagaa
cagaagggcagatcatcacagcatcctgggtatggtgatgcaggagttggattcccacag
atggctaatgcagctgcaattgcagcagcttttggaggaggtttgcctccaggaataagt
gggacaaatgataggtgcacagtgctcgtttccaatctaaatcctgatagaatagatgag
gataagctattcaacttgttctcactctatggaaacattgtgagaattaaacttctacat
aataaaccagatcatgctcttgttcaaatgggtgatggcttccaggctgaactggcagta
cattttctcaagggggccatgctatttgggaagcgactggaggtcaatttttcaaaacat
ccaaatataacacagggaactgatacccatgaatatgtgaactcaaatctcaaccgcttt
aatcgcaatgctgcgaagaactaccgttactgctgctcccctacaaagatggttcatctt
tctactttacctcaggatgtcactgaagaggaaattgtgaaccacttggcgcaacatggc
accatcgttaataccaagctctttgaaatgaatggaaagaagcaagcccttgttatgttt
gaaaccgaggagcaagctacagaagcccttgtttccaagcacgcaacctcacttggtggg
tcaataattcgaatttcattctctcagttgcagacaataagagagaactcacagtaa
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