Gossypium hirsutum (upland cotton): 121214909
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Entry
121214909 CDS
T04793
Name
(RefSeq) pre-mRNA-splicing factor SLU7
KO
K12819
pre-mRNA-processing factor SLU7
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
121214909
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ghi03041
]
121214909
Spliceosome [BR:
ghi03041
]
Complex C
Other components
Step II factors
121214909
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Slu7
zf-CCHC_4
CrtC
Tudor_3
Motif
Other DBs
NCBI-GeneID:
121214909
NCBI-ProteinID:
XP_040945354
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Position
A02:5225424..5229502
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AA seq
541 aa
AA seq
DB search
MATASVAFKSREDHRKQLELEEARKAGLAPAEVDEDGKEINPHIPQYMSSAPWYLNAERP
SLKHQRKWKSDPNYTKSWYDRGAKIFQAEKYRKGACENCGAMTHDAKSCMERPRKKGAKW
TNMHIAPDEKIETFELDYDGKRDRWNGYDASTYARVIERYEARDEARRKYLKEQQLKKLE
EKNSKNEGEGEGEGGEISDEEDDDDALKVDEAKVDESKQMDFAKVEKRVRTTGGGSTGTV
RNLRIREDTAKYLLNLDVNSAYYDPKTRSMREDPLPDADPNEKFYEGDNQYRMSGQALEF
KQLNIHAWEAFDKGQDIHMQAAPSQAELLFKNYKVIKEKLKSKTKDTIMEKYGNAATEEE
IPMELLLGQSERQVEYDRAGRIIKGMETSLPKSKYEEDVFINNHTSVWGSWWKDHQWGYK
CCKQTIRNSYCTGAAGIEAAEAATDLMKSNIARKASSEDAPAPAQEKKHVTWGTDVPEDL
VLDEKLLTEALKKEEEKRREEKDERKRKYNVRWNDEVTAEEMEAYRMKRVHHDDPMKDFL
N
NT seq
1626 nt
NT seq
+upstream
nt +downstream
nt
atggctactgcatcagtggcgtttaaatcaagagaggatcaccgaaaacagctggaatta
gaggaagctcgaaaggcggggcttgctccggctgaggttgacgaggatggaaaagaaatt
aaccctcatattcctcagtatatgtcatcagcaccttggtatcttaacgctgaaagacct
agtttgaagcatcaacggaagtggaaatctgatcccaattataccaaatcttggtacgat
agaggcgcgaagatatttcaagctgaaaaatatcgaaaaggagcctgcgagaactgtgga
gccatgacacatgatgcaaagtcatgcatggagaggcctcgtaaaaagggcgcaaaatgg
acgaacatgcacattgcacctgatgaaaagatagagactttcgaactggattatgatggc
aagcgtgatagatggaatggttatgatgcatctacatatgctcgtgtcattgaaaggtat
gaggcaagggatgaggctagaaggaagtatctgaaagaacagcagctgaaaaagttggag
gagaaaaatagtaaaaacgagggagagggagagggggagggaggagagattagtgacgaa
gaagatgatgatgatgctctgaaggttgatgaagcgaaggttgatgagagcaaacagatg
gactttgctaaggttgagaagcgtgttcgtaccactggcggagggagcaccggaactgtg
aggaacttgcgtattcgggaagacacagcaaaatatcttttgaatcttgatgtcaattcc
gcatattacgatcccaaaactcgatcaatgcgtgaagatccacttcctgatgctgatcct
aatgagaagttctatgaaggtgataatcaatataggatgagtgggcaagcattggagttc
aagcagctcaatattcatgcgtgggaagcatttgataaaggtcaagatattcacatgcag
gctgctccatcccaagctgaactcctcttcaagaattacaaggtcattaaagagaagttg
aaatcaaagacgaaagataccataatggaaaagtatggcaatgcagcgactgaagaagag
atacccatggagcttctcttagggcaaagtgagaggcaggtcgaatatgatcgtgctgga
aggattattaagggaatggaaacttctcttccaaaaagtaagtatgaagaagatgttttc
attaataatcacactagtgtctggggctcttggtggaaggatcaccaatgggggtacaag
tgttgcaagcagaccattcgcaatagttactgtactggtgcagccggtattgaagctgca
gaagcagccacagacttgatgaagtcaaacattgctcgtaaagcatcctccgaagatgcc
ccagctcctgcacaggagaagaaacacgttacttggggaactgatgttcctgaggacttg
gttctcgatgaaaaacttctcactgaggctcttaagaaggaggaggagaagaggagagag
gagaaagatgaaagaaaacggaagtataatgtcagatggaatgatgaggtaactgctgag
gaaatggaggcatatcggatgaaaagggtacaccacgatgatccaatgaaggatttctta
aattga
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integrated database retrieval system