KEGG   Gossypium hirsutum (upland cotton): 121215525
Entry
121215525         CDS       T04793                                 
Name
(RefSeq) proliferating cell nuclear antigen
  KO
K04802  proliferating cell nuclear antigen
Organism
ghi  Gossypium hirsutum (upland cotton)
Pathway
ghi03030  DNA replication
ghi03410  Base excision repair
ghi03420  Nucleotide excision repair
ghi03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:ghi00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    121215525
   03410 Base excision repair
    121215525
   03420 Nucleotide excision repair
    121215525
   03430 Mismatch repair
    121215525
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:ghi03032]
    121215525
   03400 DNA repair and recombination proteins [BR:ghi03400]
    121215525
DNA replication proteins [BR:ghi03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    121215525
DNA repair and recombination proteins [BR:ghi03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     121215525
   MMR (mismatch excision repair)
    Other MMR factors
     121215525
  TLS (translesion DNA synthesis) factors
   Other TLS factors
    121215525
SSDB
Motif
Pfam: PCNA_C PCNA_N Rad9 Ribosomal_L14
Other DBs
NCBI-GeneID: 121215525
NCBI-ProteinID: XP_040946191
LinkDB
Position
D03:45591215..45593006
AA seq 266 aa
MLELRLVQGSLLKKVLEAIKDLVNDANFDCSATGFSLQAMDSSHVALVALLLRSEGFEHY
RCDRNISMGMNLGNMSKMLKCAGNDDIITIKADDGSDTVTFMFESPTQDKISDFEMKLMD
IDSEHLGIPEAEYHAIVRMPSAEFARICKDLASIGDTVVISVTKEGVKFSTRGDIGTANI
VLRQNTTVDKPEEATIIEMNEPVSLTFALRYMNSFTKATPLSNTVTISLSSELPVVVEYK
IAEMGYVRFYLAPKIEEDEDETKPQV
NT seq 801 nt   +upstreamnt  +downstreamnt
atgcttgagcttaggctagttcagggttcgcttctaaagaaagtcttggaagcgattaag
gacttggtcaacgatgccaacttcgactgttcggcgacggggttttctctgcaggccatg
gattcgagtcatgttgcgctggtggccctgttgctgagatcggaagggttcgagcactat
cgctgcgacaggaacatttccatggggatgaatctcggtaacatgtccaagatgctgaaa
tgtgccggaaatgatgacatcatcacaatcaaggctgatgatggcagcgacactgttact
ttcatgttcgagagccccacccaagacaagatatcagattttgagatgaagctgatggat
attgatagtgaacaccttgggatcccagaagcagagtaccatgctattgttaggatgcct
tcagctgaatttgcaaggatttgcaaagatcttgcaagcattggtgacaccgttgttatc
tctgttaccaaggaaggtgtgaagttttccacaaggggtgatatcggaactgcaaatatt
gttcttaggcagaataccactgtagataaacctgaagaagcaacaattatagagatgaat
gagccagtatcattgacatttgcattgaggtacatgaattcatttacaaaggctactcca
ttgtcaaacacagtgacaatcagcttgtcatcagagctgcctgttgtggtcgagtataag
atagctgagatgggttatgttaggttctacttggcacccaagattgaagaagatgaggat
gagactaagccacaagtttaa

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