Gossypium hirsutum (upland cotton): 121217104
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Entry
121217104 CDS
T04793
Name
(RefSeq) transcription factor SPATULA-like
KO
K28361
transcription factor SPT/ALC
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
121217104
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ghi03000
]
121217104
Transcription factors [BR:
ghi03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
HLH domain only
121217104
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GFIT
Motif
Pfam:
HLH
Ribosomal_S20p
bHLH_LHW
bHLH_SAC51
CENPU
Motif
Other DBs
NCBI-GeneID:
121217104
NCBI-ProteinID:
XP_040948601
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Position
D05:complement(18515382..18516250)
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AA seq
182 aa
AA seq
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MADLYGGSPYSNPETEEISTILNQLLHNSSSSSSSSSSCMQFKGKNIHSFPSQVPGISTP
AANSGAGMGIPSLVNISDPETYFGANVKDSADNALSSACDFSYDSEVPDASEVPSNQERP
RSSSKRSRAAEVHNLSEKRRRSRINEKMKALQNLIPNSNKTDKASMLDEAIEYLNNFSFK
YR
NT seq
549 nt
NT seq
+upstream
nt +downstream
nt
atggcggatctgtacggtggttctccttattcgaatccggaaactgaagaaatttccact
atccttaaccagctccttcacaattcctcttcttcgtcatcttcatcatcttcgtgcatg
caattcaagggcaagaacattcactcttttccttctcaagtgccgggaatttcaacgccg
gctgctaactccggcgcggggatgggaattccgagcctggtcaatatctctgatcctgaa
acgtattttggagctaacgttaaagatagcgctgacaatgcgttatcttctgcctgcgat
ttcagttatgacagcgaggttccggacgcatcggaggtgccatcaaatcaagaacggcca
cggagttcatcgaagcgcagcagagcagccgaagtccataatttatcggaaaagaggagg
aggagtcggattaatgagaaaatgaaagctttacagaatctaatcccgaactctaacaag
acggataaagcttctatgcttgacgaggcgatcgagtatttaaacaacttcagcttcaag
tacaggtga
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