Gossypium hirsutum (upland cotton): 121217643
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Entry
121217643 CDS
T04793
Name
(RefSeq) gamma-tubulin complex component 6-like isoform X1
KO
K16573
gamma-tubulin complex component 6
Organism
ghi
Gossypium hirsutum (upland cotton)
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ghi03036
]
121217643
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ghi04812
]
121217643
Chromosome and associated proteins [BR:
ghi03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
gamma-tubulin ring complex
121217643
Cytoskeleton proteins [BR:
ghi04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Gamma-tubulin complex components
121217643
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GCP_C_terminal
GCP_N_terminal
FAM92
Motif
Other DBs
NCBI-GeneID:
121217643
NCBI-ProteinID:
XP_040949316
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All DBs
Position
D05:6425023..6437673
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AA seq
1262 aa
AA seq
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MAVETNFASLFEKLKVEDPWLPPRTWESIPSQSGPLPPLPDSQPPISSSSSVSEATLVRL
ALNALQGVESSLCSIEKLSAAFFSDPADRTFHQTPSLWYRSSSTHALGKILKSIGRSGFL
VFLLHKFVEYFTNLNPNGNSFSLRKGWENSQAADNQNHGGHRVKDEEGPKYSLVNQAFSV
AVGKVLEGYICALDTLYASVNVRRSKSTEVSTGVSSGCLTSVVYSGITLLEVYLHTKDLR
TQIEALGNICNLYDLALCFLESSFEELSYKATTGFHKFFRGGDLLSYLYTQVKVADPAHH
ALLKFLFLRSCEPYCEFIRSWIFKAEINDPYKEFVVEYMDTLQHRSAGKDGIPIDFPVAN
ITERDGVVVPCFLKDLLTPLVRAGQQLQVLMKLLELRKHVDTGDHTYSDFLPCWSGFAGS
NPFYASSITFGKENIEALVLMRNSYYERMEEKLENLLTGLEFNCQQVISHRAEPHLFGTS
GDTPNIAASLTVDDKLVINSTMKRSFSNVSLDNNDFDDSSTKDGSSHEADIFEPFESSSM
SSFEEHTESEQLIEHSNNLVWPKQNYFSALSFSVSTPFGNSLQLALQNGKSDRMESSLQA
GTGGHGNFIGCEPNGIYDHLSPHLKSNWLCAEVESANILTSKGWPVNSARNNAFCIDGDD
RDDKRSHLCDSDIKTRKCNTQFFDKFVQHFNESIAINNISAVDTSNEGQHEKDSTSGLFQ
LRQFKLTCNGSLLSKNPMLTNKSFFRMMSKPGDASQIDYQQTLPYFDFSSVDDPCMVYVK
RLSSGITHEFLENTSSVTNGRGNQDDKQGYGDVLLVDNSKSSYAVPPLELRNQTQDVIST
TVSGSSCWESLLGSFSTPNSSGTIDMKLNTSSTFEIPLDFVIDKCLLQEILLQYNYVSKL
TIKILEEGFDLQEHLLALRRYHFMELADWADLFIMSLSHHKWCVTEVDRRLSEIQGLLEL
SVQRSSCERDPHKDRLFIYAKGHGLLPLSTSTIGVHSFDFLGLGYRVDWPISIILTPGAL
KIYADIFNFLIQLKLAVFSLTDVWCSLKDVVHLICQKHHPTLHEREVGHFNKLMKLRHQV
NHFVSTLQQYVQSQLSHVSWCKFLHSFKHKVKDMMDLESVHMSYLTDSLHIIKVQHVRAL
VRGYDLLRTLQKTCFLSDETKPIASTIENILQCALDFRSCLTGDIWNVGLAEGDLQDKLS
KINISQVLFIKEKFDKNLKELHLLYLKSPKHGESGLSCFWGYLNYNDYYFNENEMSYYAF
SV
NT seq
3789 nt
NT seq
+upstream
nt +downstream
nt
atggcggtggagacgaatttcgcatcgttgtttgagaagctgaaagtggaagatccatgg
ctccctcctcgaacctgggaatccattccttctcaaagcggcccccttcctcctcttcca
gactctcaacctcccatttcctcctcttcatcagtctccgaggcaactttggtgaggttg
gcactaaatgcactgcaaggcgtagaatcatctctttgtagcatagaaaaactttctgct
gcctttttttctgatcctgcggataggactttccatcaaactcctagtctttggtaccgg
tcttccagcactcatgctttggggaagattctcaaatcaataggccgttcaggtttccta
gttttccttctccataagtttgtagaatattttacaaatttgaatcccaatggaaattca
ttttcactacggaagggctgggaaaattctcaagcagcagacaatcaaaatcatggtggc
cacagagtgaaagacgaagagggccctaaatatagccttgttaatcaagcattctctgta
gctgtaggaaaggttttggaagggtacatttgtgcgttggacacattatatgcatcagta
aatgtaaggcgttcaaagagtactgaagtctctacaggtgtatcttcaggctgtctcaca
agtgtggtttactctggaattacgctattggaggtatacctgcacacaaaggatttgagg
acccagattgaagctcttgggaatatatgcaatctgtatgatttagctctttgcttcttg
gaatcttcttttgaagaactaagttataaggcaaccacgggatttcataaattcttcagg
ggaggtgacctgcttagttacttgtatacacaagtaaaggttgcggaccctgctcaccat
gctttactcaagtttctttttcttcggtcatgtgaaccttattgtgagtttataaggtcc
tggatttttaaagctgagattaatgatccttataaggagtttgttgtagagtacatggat
acgttacaacatcgttctgctggtaaagatggaatccctattgactttccggttgcaaat
attacggagcgggatggagttgttgttccatgtttcctgaaggatcttttgactccactt
gttagggctggtcagcagcttcaagttctaatgaaattgcttgaattgcgtaaacatgtt
gatactggagaccatacttattctgattttcttccctgctggagtggttttgctggcagt
aatccgttttatgcttcttcaatcacttttggcaaagaaaatatagaagcattggttctc
atgcgtaatagttactatgagaggatggaggagaaacttgaaaatttactgacagggttg
gaattcaattgtcaacaggtaatttcgcatagggctgaacctcatttatttggtactagt
ggagacactccaaatattgcagcttcactcacagtggacgacaaattggttattaattca
acaatgaaacgaagtttctctaatgtgtcgcttgacaataatgattttgatgactctagt
acaaaagatggatcctctcatgaagctgacatctttgaaccatttgagtcttcatctatg
agtagttttgaagagcatactgagtctgagcagttgattgaacactctaataatttagtt
tggcctaaacaaaattatttctctgccctaagcttttctgttagtaccccatttggaaac
tcattgcagctagctttgcagaatggcaagtctgaccgtatggaaagcagtttgcaagct
ggaactggtgggcatggcaattttataggttgtgaacctaatgggatatatgatcactta
tctccgcacctcaagtcaaactggttgtgtgcagaggttgaatctgcaaatattctaact
tccaaaggttggccagttaacagtgcaaggaataatgccttctgtattgatggcgatgac
agagatgataaaagatcacatctatgtgattctgacataaagacgagaaaatgtaacacg
caattctttgataaatttgtgcaacattttaatgaatcaattgctatcaacaatatttca
gcagtggacacctcaaatgagggtcaacatgaaaaggactctacttcagggttattccaa
ttgcgacagttcaagcttacttgcaatggtagccttctgagcaaaaatccaatgttgaca
aacaagagttttttccgtatgatgagcaaacctggtgatgcaagccagatagactaccag
caaactttaccttattttgatttttcttcagttgatgacccttgtatggtttatgtcaaa
aggctatcatctgggattacacatgaatttcttgagaataccagttctgtgacaaatggt
aggggtaatcaggatgacaaacaaggctatggagatgttctcttggttgacaattcaaaa
agttcttatgctgttccacctttggagttaaggaatcaaacccaggatgtcatttcaaca
actgtttctggcagcagttgttgggagagtttgcttggtagttttagcacccctaatagc
agtgggactatagatatgaagctgaatacatcttccacgtttgagataccccttgacttc
gtaattgacaaatgcctactgcaggaaatcttgcttcaatataactatgtcagcaaatta
accatcaagatacttgaagaaggttttgatttgcaagaacacttgttagcgctgcggcga
tatcattttatggaactggcagactgggcagatttgttcatcatgtccctttcgcatcat
aaatggtgtgttacagaggtggaccggagactctctgaaattcaaggacttcttgagttg
tccgtgcagaggtcatcttgtgaaagagaccctcataaagatcggttatttatttatgca
aaagggcatgggttgttgcctctttcaacttctacaattggtgttcattccttcgacttt
ttaggtctgggctatcgagtggattggcctatcagcattattttgactcctggtgcattg
aaaatatatgctgatatattcaactttctgatacaactgaagcttgctgttttttcactg
actgatgtatggtgctcattaaaggatgtagtgcacttgatctgtcaaaaacaccatcct
acactacatgaacgtgaagtgggccattttaacaagttaatgaagttgaggcatcaggtt
aatcattttgtatctacactacagcaatatgtacagtcacaactatcacatgtatcatgg
tgcaagtttcttcactcatttaagcacaaggtcaaagatatgatggatcttgagtcggtg
catatgtcatatctaactgattcactacatattatcaaggtccagcacgtccgagcattg
gtacggggatatgaccttctaagaacccttcagaaaacatgttttctatctgatgaaaca
aaacctatagccagtaccatagagaatattttgcagtgtgccctagacttccggtcttgt
cttactggtgatatatggaatgtgggacttgctgaaggtgatttacaggataaactttct
aagatcaacatatctcaggttcttttcataaaagaaaagttcgacaaaaatcttaaagaa
ctgcatctactctacctcaaatcacctaaacatggagaatctgggctttcgtgtttctgg
ggatatctcaactataatgactattactttaatgaaaatgaaatgagctattatgctttc
tcagtctga
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