KEGG   Gossypium hirsutum (upland cotton): 121217875
Entry
121217875         CDS       T04793                                 
Name
(RefSeq) ras-related protein Rab7
  KO
K07897  Ras-related protein Rab-7A
Organism
ghi  Gossypium hirsutum (upland cotton)
Pathway
ghi04144  Endocytosis
ghi04145  Phagosome
ghi04148  Efferocytosis
Brite
KEGG Orthology (KO) [BR:ghi00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    121217875
   04145 Phagosome
    121217875
   04148 Efferocytosis
    121217875
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:ghi04131]
    121217875
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:ghi04147]
    121217875
   04031 GTP-binding proteins [BR:ghi04031]
    121217875
Membrane trafficking [BR:ghi04131]
 Endosome - Lysosome transport
  Rab GTPases and associated proteins
   Rab GTPases
    121217875
Exosome [BR:ghi04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   121217875
  Exosomal proteins of other body fluids (saliva and urine)
   121217875
  Exosomal proteins of colorectal cancer cells
   121217875
  Exosomal proteins of bladder cancer cells
   121217875
GTP-binding proteins [BR:ghi04031]
 Small (monomeric) G-proteins
  Rab Family
   Rab7/9 [OT]
    121217875
SSDB
Motif
Pfam: Ras Roc Arf MMR_HSR1 Gtr1_RagA GTP_EFTU ATP_bind_1 cobW RsgA_GTPase AAA_16 Septin nSTAND3 AAA_7 PduV-EutP AAA_22 AAA_24 DAP3 NACHT NTPase_1 MCM Sigma54_activat nSTAND1 NB-ARC AAA_5 ATPase_2
Other DBs
NCBI-GeneID: 121217875
NCBI-ProteinID: XP_040950331
LinkDB
Position
D05:complement(23709392..23715446)
AA seq 205 aa
MSMRRRTLLKVIVLGDSGVGKTSLMNQYVHKKFSQQYKATIGADFVTKELQIDDRLVTLQ
IWDTAGQERFQSLGVAFYRGADCCVLVYDVNVMKSFDTLDNWHDEFLKQANPADPRTFPF
ILLGNKIDIDGGNSRVVSEKKAKDWCASKGNMPYFETSAKEDINVDAAFLCIAKTALANE
REQDIYFQGIPEAVTETEQRGGCAC
NT seq 618 nt   +upstreamnt  +downstreamnt
atgtcaatgagaagacgaacgttgctcaaggtcattgttctcggcgacagcggggtgggc
aagacgtctttgatgaatcaatatgttcataagaagttcagtcagcaatataaagcaacc
attggtgctgattttgtcactaaggaactccagattgacgatcgccttgtcactctgcaa
atatgggataccgcaggacaggagcggtttcagagtcttggtgtcgctttctataggggt
gcagattgctgtgtgctagtttacgatgttaatgttatgaaatcattcgatacccttgat
aattggcatgacgagtttcttaaacaggcaaatccagctgatcccaggacatttcctttt
atattgcttgggaacaaaatagatatagatggtggtaatagccgagtggtctcagagaag
aaagcaaaagactggtgtgcatcaaaaggaaacatgccttactttgaaacatcagcaaaa
gaagatatcaatgttgacgctgcattcctttgtattgccaaaactgctctagctaatgag
cgcgagcaggacatatatttccagggcataccagaggctgtgaccgaaaccgagcaaaga
ggcggttgtgcatgttga

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