Gossypium hirsutum (upland cotton): 121217897
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Entry
121217897 CDS
T04793
Name
(RefSeq) cryptochrome-1-like isoform X1
KO
K12118
cryptochrome 1
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi04712
Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09150 Organismal Systems
09159 Environmental adaptation
04712 Circadian rhythm - plant
121217897
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Motif
Pfam:
FAD_binding_7
DNA_photolyase
Cryptochrome_C
Motif
Other DBs
NCBI-GeneID:
121217897
NCBI-ProteinID:
XP_040950418
UniProt:
A0ABM3A6D3
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Position
D05:complement(26300450..26304025)
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AA seq
673 aa
AA seq
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MSSIVWFRRDLRVEDNPALLAGVRAGPVFAVFIWAPEEEGHYQPGRVSRWWLKHSLALLD
SSLRSLGTCLITKRSTDSVSSLLQIVKSTGATQLFFNHLYDPISLVRDHRAKEVLMAHGV
AVRSFNADLLYEPWDVNDDNGRPFTTFTAFWEKCLNMPFDPEAPLLPPKRIISGDVLTCT
TDVLVFEDELEKGSNALLARAWSPGWSNADKALTTFINGPLIEYSKNRRKADSATTSFLS
PHLHFGEVSVRKVFHLVRMKQVLWANEGNKAGEESVNLFLKSIGLREYSRYLSFNHPYSH
ERPLLGHLKFFPWVVNEGYFKAWRQGRTGYPLVDAGMRELWATGWLHDRIRVVVSSFFVK
VLQLPWRWGMKYFWDTLLDADLESDALGWQYISGTLPDGREFDRIDNPQFEGYKFDPNGE
YVRRWLPELARLPTDWIHHPWNAPESVLQAAGIELGSNYPLPIVGIDAAKSRLQEALSEM
WQLEAASRAAIENGTEEGLGDSSESVPFAFPQDIQMEENIEPARNNAPATTRRYEDQMVP
SITSSLLRGEHEESSSYLRTSAEDSRAEVPGTVNINREQRRDTLNQAIPETARSLQLNFP
IGLRNAEDSTAESSSSSRRERDGGVVPVWSPPSSSYPEQFIGEESGIGASSSFLQGHPQS
HQIINWRRLSQTG
NT seq
2022 nt
NT seq
+upstream
nt +downstream
nt
atgtctagcatagtttggtttagaagggatcttagagttgaagataatccagcactctta
gccggagttagggcaggccctgtttttgcagttttcatatgggcacctgaagaagaaggc
cattatcaacctggaagggtttcaagatggtggcttaaacatagtttggctcttcttgat
tcttctttgaggagcctgggaacttgcctcataacaaagagatcaactgatagtgtttca
tctcttctccagattgttaaatccactggtgccactcagctcttcttcaatcacttgtat
gatcctatatccctggttagggatcatcgagcaaaggaagtattgatggcccatggtgta
gctgttcgatcgttcaatgcggatttgctttatgaaccttgggatgtaaatgatgataat
ggccgccctttcactacttttactgctttctgggaaaaatgccttaacatgccttttgac
cctgaggctcctcttcttccacctaaaagaataatttcaggtgatgtgttaacttgcact
acggatgtgttggtgtttgaagatgaattggagaagggaagcaatgcgcttttagctcga
gcatggtcaccagggtggagcaatgcggataaagctttgacaacgttcattaatggacct
ttaattgagtactcgaagaacagaagaaaagctgatagtgcaacaacttcatttctttcc
ccccatttgcattttggggaggttagtgtccgaaaagtctttcatctcgttcgaatgaag
caggttttatgggctaatgaagggaacaaagctggtgaagagagtgtaaacttgtttctg
aagtcgatcggcttgagggaatactcaagatacttgagttttaaccatccttacagccat
gaaaggcctcttctcggacatcttaagtttttcccttgggttgtcaatgagggttatttc
aaggcatggagacaaggaagaacaggttatccattggtggatgctggcatgagagagtta
tgggccaccggttggctacatgatcgtattcgagttgttgtatcgagtttttttgtcaaa
gttttgcagcttccatggagatggggtatgaagtatttctgggataccctcttggatgca
gatttagaaagcgatgctctcggttggcagtatatatccggtactctcccagatggtcgt
gagttcgaccgcatcgataatccgcagtttgaaggttacaaattcgatccgaatggagaa
tatgtccggcggtggcttccagaacttgcaagactaccaactgattggattcaccatcca
tggaatgctcctgaatctgtactccaagctgctggcatcgagcttgggtcaaattaccct
ctgcctattgtaggaatagatgctgcaaaatccaggttgcaagaagcactttcagagatg
tggcaactagaagcagcttcaagagctgcaattgagaatggaactgaggaaggcctcgga
gactcttccgagtcagtgccatttgcatttccgcaagacatacaaatggaggaaaacatt
gaaccagcaaggaacaatgctccagctacaacacggagatatgaggatcagatggttcct
agcatcacttcttcgttgttgagaggtgaacatgaagagtcttcttcgtatcttagaact
tcagcagaagatagcagagcagaagttccaggaactgtaaatataaatcgagaacaacgg
agagacacattaaaccaagcgattccagaaacagcacgcagcctgcaacttaacttcccg
attgggttgagaaatgctgaggattccactgcagaatcatctagtagtagtaggagagaa
agggatggcggagttgttccagtttggtccccgccatcttcgagttaccccgagcaattt
ataggtgaggaaagtggtatcggtgcaagctcatcttttctacaagggcatccacagtcc
caccaaatcataaattggaggcgattatctcaaaccgggtaa
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