Gossypium hirsutum (upland cotton): 121217950
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Entry
121217950 CDS
T04793
Name
(RefSeq) amino acid transporter AVT1C-like
KO
K15015
solute carrier family 32 (vesicular inhibitory amino acid transporter)
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
121217950
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ghi02000
]
121217950
Transporters [BR:
ghi02000
]
Solute carrier family (SLC)
SLC32: Vesicular inhibitory amino acid transporter
121217950
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GFIT
Motif
Pfam:
Aa_trans
Trp_Tyr_perm
Motif
Other DBs
NCBI-GeneID:
121217950
NCBI-ProteinID:
XP_040950643
UniProt:
A0ABM3A706
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Position
D05:complement(31992454..32000456)
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AA seq
553 aa
AA seq
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MKNSVSDHSFYIESDEEDEEKVFIPDENGEEVDGNESDDSDSSAENQQQNKPGSYNTSWP
QSYRQSIDLYSSVPSPSIGFLGTPTLSRLSSSYLSSSLTRRHTPETLSSATKPLLPTVDD
QIEPHRRSSHALLPPIPSRRQSVRLDDKTSSKVSHEISLPRHCTNGQAVLNGINVLCGVG
ILSTPYAAKEGGWLGLIILFTFALLSFYTGLLLRQCLDSQPGLETYPDIGQAAFGTYGRI
ALSIILYVELYACCVEYIILEGDNLASLFPNAYVSLGGLELSPQRLFALMATLAVLPTVW
LRDLSVLSYISAGGVVASILAVLCLFWVGLIDQVGFHNKGTTLNIATLPVAVGLYGYCYS
GHAVFPNIYTSMANPNKFPSVLIACFAICSLLYAGTAVMGYTMFGEATESQFTLNMPKDL
IASKIAVWTTVVNPFTKYALTMSPVAMSLEELIPSTHLKSHIYAIIIRTSLVISTLIVGL
TIPFFGLVMSLIGSLLTMLVTLILPPACYLSILRGKVTRIQRTLCIMVITVGVVSSAFGT
YSALSKIVENLRS
NT seq
1662 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaactcagtgtcggatcatagtttttacatcgagagcgatgaagaagatgaagag
aaggtttttatcccagatgaaaatggtgaagaagttgatggaaatgaatctgatgattca
gattcttcggccgaaaatcaacagcaaaataaacccggttcgtacaacacttcatggcct
caaagttacaggcaatccattgatttatatagcagcgtaccatcgccgagcatcgggttc
ctaggcactccaacactttcaagactaagcagttcatatctttcatcgtccttaaccaga
cgacacactccagaaacgttatcttctgcgacgaagccattattgccaaccgtcgatgat
caaatagaacctcataggcgaagctctcacgccttgctacctccgatcccgtcgaggaga
caatccgtaagattagatgataaaacatcatccaaagtctcgcatgaaatttcactccct
cgacattgcacaaacggtcaagctgttctaaatgggattaatgtactatgtggagtgggg
atcctatcaaccccatacgcagctaaagaaggaggatggttagggcttataatattattc
acatttgcactgctttcattctacactgggttgctcttgcgccaatgccttgatagtcaa
cctggcctagaaacttaccctgatattggtcaagctgctttcggtacttatggtagaatc
gccctctctataattttatacgtggagttatatgcttgctgtgttgagtatataatttta
gagggtgataacttggcatctttattcccaaatgcatacgttagtttgggtggattggag
ttgagcccgcaacgtctgtttgctttgatggcaacccttgctgtgctccccactgtttgg
ctcagagacctcagtgttcttagttatatttctgctggtggagtggtggcatcaatcttg
gcagtactttgcttattttgggttggtttgattgaccaagttgggttccacaacaaaggg
acaaccttaaacattgctactcttcctgttgctgttggactttatggttactgctattca
ggacatgctgtttttcccaacatctatacttcaatggcaaaccctaataaattcccttcc
gtccttattgcctgttttgcaatctgttcattgttgtacgctggaactgcagttatgggg
tacacgatgtttggagaagcaacggaatcacagttcactcttaatatgcctaaagatctc
attgcttccaagattgcagtgtggactacggtagtcaacccatttaccaagtatgcatta
acaatgtcaccagtggcaatgagtcttgaagagttgattccatcaacccatcttaagtct
catatctatgcaatcataattagaacatcgcttgtgatctcgaccttgattgttggtctc
accatccccttctttggattggtaatgtcattgatcggatctttgctcacaatgcttgtg
accttaatacttccgcctgcttgttatttaagcatcttgaggggtaaagtaactcgtatt
cagagaacactttgtattatggttattacagtgggagtagtttcatcagcttttggaaca
tactcagcactctccaagattgttgagaatttgagaagctaa
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