KEGG   Gossypium hirsutum (upland cotton): 121218173
Entry
121218173         CDS       T04793                                 
Name
(RefSeq) trimethylguanosine synthase-like isoform X1
  KO
K14292  trimethylguanosine synthase [EC:2.1.1.-]
Organism
ghi  Gossypium hirsutum (upland cotton)
Brite
KEGG Orthology (KO) [BR:ghi00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:ghi03041]
    121218173
Spliceosome [BR:ghi03041]
 Other splicing related proteins
  Proteins involved in snRNP biogenesis
   Other proteins involved in snRNP biogenesis
    121218173
SSDB
Motif
Pfam: Methyltransf_15 TRM5-TYW2_MTfase Methyltransf_31 Methyltransf_25 UPF0020 WW Methyltransf_11 N6_N4_Mtase Tissue_fac Methyltransf_18 WW_TCERG1
Other DBs
NCBI-GeneID: 121218173
NCBI-ProteinID: XP_040950875
LinkDB
Position
D06:1795184..1800650
AA seq 683 aa
MDTIENQCEAPAIKALGSLFKLTQVHLWDYGSKETREFSFLLSDTTKSCTKNDKNCSSIS
HGSCDFSTSVEDIELAKEMDALGLPLSFHTNKQTSSKMTVSRKKGTRPKHSNRHKDIEEV
MEFSKVSEMEIESPIFHDNSSSSFCESSYHDVAVGVDGSLCLGHKQEDSSSLVGMEQNND
GISDLVTNDAWECNLARQSDVVSKDDDINMVSSTSLGAELLQEYCLMEPGINHCNNKEDG
SSMEHEKVEKVCTCSGTQQLLVPKSFSTNSEGLDSDCNDHTYGGDFGDWRVYWDSFYSRN
YFYNIKTQASTWDPPPGMENLVFANLNNKSDEMAIDSIEKSVHDGGLEKLLSDELSNGTE
LAAASNLTIPSVSKSFELAGEHCETSDFCDGELTSELISDVQDNLDSVTKTPTETISDAD
EIVLETVALAKGQVDTELEAVTRKGKKKTRKRSQRKLSRDDEELQFQGMSEEHSAIIGKY
WCQRYLLFSRFDDGIKMDEEGWFSVTPESIARHHASRCGSGIVVDSFTGVGGNAIQLAQR
SAHVIAIDIDPKKIDYAYQNATVYGVNDQIDFVTGDFFTIAPKLKADTVFLSPPWGGPDY
AKVEIYDLKTMLKPHDGYFLFNVAKKISCRIVMFLPRNVDLNQLAELSLSAQPPWSLEVE
KNFLNGKLKGITAYFTDTAFEGI
NT seq 2052 nt   +upstreamnt  +downstreamnt
atggacacaatcgaaaaccaatgcgaagctccagctatcaaagctttgggttctctcttt
aagctcactcaagttcacttatgggattatggttctaaggagactcgggaattttctttc
ttattatccgacaccactaaatcatgtacaaaaaatgataagaactgctcaagcatttct
catgggagctgtgatttcagtacttcagtagaggatattgaattggctaaagaaatggat
gctttggggctccccctttccttccacaccaacaagcagacaagtagtaaaatgactgtt
agcagaaagaagggtacacgtccaaagcattctaatcgtcataaagatattgaagaagtg
atggaattttccaaagtgagtgagatggagattgaatctcctatttttcatgataactcg
agcagttctttttgtgaatcatcttatcatgatgttgcagtgggtgttgatggatcccta
tgccttggtcataagcaagaagattcatcaagcttggttgggatggaacaaaacaacgat
gggatttctgaccttgtgactaatgatgcttgggaatgtaacttggcacggcagagtgat
gttgtgtctaaggatgatgatataaatatggtgagctcaactagtttaggtgctgaactt
ttacaagaatattgcttaatggaaccaggtatcaatcattgtaataacaaagaagatgga
agctcgatggagcacgaaaaggttgagaaggtttgtacttgtagtggcactcagcagcta
cttgttcccaagtcattttctacaaattcagaagggcttgattctgattgtaatgaccat
acatatggtggtgattttggtgattggcgggtgtattgggactctttctactcgaggaac
tacttttataatatcaaaactcaagcttccacgtgggatccacccccgggaatggaaaat
ctagtttttgctaaccttaataataagtcagatgaaatggctatcgactccattgagaaa
tccgtacatgatggtggattagagaagctgttatctgatgagctttcaaacgggaccgaa
cttgctgctgcttctaatttgacaataccttctgtaagcaagagttttgagcttgctggt
gaacattgtgagactagtgacttttgtgatggtgaacttacatcagaattaatatcagat
gtccaggacaatcttgacagtgtgaccaagacacccactgaaacaatatctgatgctgac
gaaattgttctagagactgttgctttagcaaaaggtcaggtggatactgagcttgaggct
gtgactaggaaagggaaaaagaaaacaagaaaacgatctcagaggaagttatctcgggat
gatgaagaacttcaatttcaaggaatgtccgaggagcattccgccattataggtaaatat
tggtgtcagagatacctactattctccagatttgatgatggtattaaaatggacgaggaa
gggtggttttctgtaactccagagtctatagctaggcatcatgcatcccgttgcgggagt
ggcattgtggtcgactcttttaccggagttggtgggaacgccattcaattggcccagagg
agtgcacatgttattgctattgacattgatccaaagaagatagattatgcatatcagaat
gcaactgtctatggcgtcaatgaccaaatagactttgtaaccggagattttttcactata
gcacctaaattgaaggcagacactgtcttcttatctcctccttggggaggtcctgattac
gctaaagtagagatatatgacctgaagacaatgctgaagccacatgacggatatttcctg
tttaacgttgcgaagaaaatttcctgcagaattgtcatgtttctccctagaaatgtagat
ctcaaccaattggctgaattgtccctgtctgcacagcctccttggtcattagaggttgag
aaaaactttttgaatggcaagttgaaggggataactgcttacttcacggatacggcattt
gaaggcatttga

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