Gossypium hirsutum (upland cotton): 121218576
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Entry
121218576 CDS
T04793
Name
(RefSeq) putative pectate lyase 2
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi00040
Pentose and glucuronate interconversions
ghi01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
121218576
Enzymes [BR:
ghi01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
121218576
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Motif
Pfam:
Pectate_lyase_4
Beta_helix
NosD
Motif
Other DBs
NCBI-GeneID:
121218576
NCBI-ProteinID:
XP_040951939
UniProt:
A0ABM3AAQ0
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Position
D06:59840788..59841947
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AA seq
350 aa
AA seq
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MNVIDECWRGNPLWRSQRQQLAKCSVGFVGKMINNFGKDVVKYKVIDPSDDPLSPKSGTL
RYGTTMIKGKVWITFKNSMTITLQRPLLLSSFTAIDGRGVDVHITGAGCLLVYQAIDIII
HGLRIHHCKAQPPSTVMGPNAKVIPLGQMDGDAIRLVTARKVWIDHNTLYECQDGLLDVT
RGSTNITVSNNWFRNQDEVMLLGHDDGHLRDKNMKVTVIFNHFGPNCNQRMPRVRHGYAR
IANNFYQGWEQYAIGGSMSPSIKSEANFFVAPNDVGNKEVTWRKGEKGLWKFYSVGDVFK
NGASFNKQTGVGGAKPNYNQEQNFKVVDAGSVKKLTSESGVLRCSRSLIC
NT seq
1053 nt
NT seq
+upstream
nt +downstream
nt
atgaatgtaattgatgaatgttggagagggaaccctctttggcgaagtcaacgacaacaa
ttggccaaatgctccgtcggttttgtcggaaaaatgatcaacaattttggtaaagacgtc
gtgaaatacaaggttattgatccttccgacgaccctttgagtcctaaatcagggaccctt
cgttatggaaccacaatgatcaaaggaaaagtatggatcacattcaaaaatagcatgacc
atcacactccaaagaccacttcttttaagcagcttcactgccattgacggtcgtggcgtc
gatgtccacataactggcgctggatgcctgttggtgtaccaagcgatcgatataatcatc
catgggcttcgcatccaccattgcaaggcccaaccacctagcactgtgatgggtccaaac
gcaaaggtgatccctttaggccaaatggatggagacgctataagattggtcaccgcaaga
aaagtgtggatcgatcataacacattgtatgagtgccaagacggcctcctcgatgtcact
cgcggttccaccaacatcaccgtgtcgaacaactggttcaggaaccaagacgaagttatg
ctcctcggacacgacgatggtcatttgagagacaaaaacatgaaggtcactgtcattttc
aaccatttcggacctaactgcaaccaaagaatgccaagagttcgccatggatatgcacgc
atagcgaacaatttctaccaagggtgggaacaatacgccatcggtggtagcatgagcccc
agcatcaagagtgaagccaattttttcgttgctccgaatgatgttgggaacaaagaggtt
acatggagaaaaggagagaaaggtttatggaaattttattcagtaggggatgtatttaaa
aatggagcatctttcaataagcaaacaggtgtaggtggagctaagcctaactataaccaa
gaacaaaattttaaggttgtcgatgctggatctgttaagaaattgacaagtgaatctggt
gttttacgatgctccagaagtttaatatgttga
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