Gossypium hirsutum (upland cotton): 121218645
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Entry
121218645 CDS
T04793
Name
(RefSeq) RHOMBOID-like protein 5 isoform X1
KO
K27605
rhomboid-like protein, plant [EC:
3.4.21.105
]
Organism
ghi
Gossypium hirsutum (upland cotton)
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ghi01002
]
121218645
Enzymes [BR:
ghi01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.21 Serine endopeptidases
3.4.21.105 rhomboid protease
121218645
Peptidases and inhibitors [BR:
ghi01002
]
Serine peptidases
Family S54: Rhomboid family
121218645
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Gene cluster
GFIT
Motif
Pfam:
Rhomboid
Saf_2TM
EhaL
Motif
Other DBs
NCBI-GeneID:
121218645
NCBI-ProteinID:
XP_040952126
UniProt:
A0ABM3ABB9
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Position
D06:64101392..64103284
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AA seq
314 aa
AA seq
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MGRPSRPSPSPPVEPTPSHDDIEKGSKRARHKSKVPPPPPPSKLWKPWLMPLVFVANISV
FLYTMYVNDCPHTSGTSKCILYEYLGRYSFQSFKENPLLGPSYITLQTLGGLDWTQVVEG
KEYWRLFSCMWLHAGLIHLLINMLSLLGLGIRLEREFGFVRIGLLYMISGFGGSLTSVLS
LARKRIVSVGASGALFGLLGSMLSELITNWSNYMNKCSALLTMLLIICLNLAIGFLPRVD
NSAHIGGFVSGLLAGFVLLMRPQYGYISSKHVPEGYQIKHKVAKHQVHQYVLFGISLVLL
ITGFAVGLQRIRRP
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
atggggcggccatcacggccatcaccatcaccacctgtagaaccaacaccgtctcacgat
gatatcgagaaaggatcgaaaagggcacgtcataagtcgaaagtacctcctcctccacca
ccatcgaaactgtggaaaccatggctcatgcctctcgtgttcgtggctaacatttcggta
tttctttataccatgtatgtcaatgattgtccacatacaagtgggacttcaaaatgtatt
ttgtatgaatatttgggaaggtactcgtttcaaagttttaaagaaaaccctcttcttggc
ccttcatatatcacgctgcagacactagggggccttgattggactcaagtggtagaaggg
aaggaatattggcgtctcttctcatgcatgtggcttcatgctggacttatccatttacta
ataaatatgttaagccttttaggccttggcatccgattggaacgtgaatttgggttcgtg
agaatcgggctgttatacatgatttccggcttcggaggtagcttgacgtctgttttatct
ctggctaggaaaagaatcgtctccgttggtgcatccggtgcgctttttggcctgttggga
tccatgctttcggagctcattacgaactggtcgaactatatgaacaagtgttcagctctg
ttgaccatgttgttgattatttgcctgaatctagccattggatttctacctcgagtcgat
aattccgctcatataggagggtttgtatccggactgcttgccggatttgtccttctgatg
cgacctcagtatggatacataagcagcaagcatgttccagagggatatcagataaaacat
aaggttgcaaagcaccaagtgcaccagtatgtgttatttggtatctccttagtcctgtta
attaccggatttgcagttggcttacaaaggattagaaggccatag
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