Gossypium hirsutum (upland cotton): 121218681
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Entry
121218681 CDS
T04793
Name
(RefSeq) uncharacterized protein LOC121218681
KO
K20523
SH3 domain-containing YSC84-like protein 1
Organism
ghi
Gossypium hirsutum (upland cotton)
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ghi04131
]
121218681
Membrane trafficking [BR:
ghi04131
]
Others
Actin-binding proteins
Nucleation-promoting factors (NPFs)
121218681
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ysc84
FYVE
FYVE_2
Motif
Other DBs
NCBI-GeneID:
121218681
NCBI-ProteinID:
XP_040952210
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All DBs
Position
D06:65625699..65629209
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AA seq
514 aa
AA seq
DB search
MEGSNQNSGFDSRISSLSLTDDTVNRSSNSGFDNQGVNVYGEYDNGLSMPTNTMEDLNDE
KEKEPRTSHQKMGKYFFYDSPLVEDTGVWIPVSIPPMLESDHEQWAKGFHSNGDYFPEGD
MGWGEFLSEEKELTMWDVIVEMILAARGKVNALASGDIQRCGVSWLSSHLLEQAWQEMAQ
TLNEVNLGNVKEILDAEPPKWLADSAASACMLCGVRFHPIMCSRHHCRFCGGIFCGECSK
GRSLMPQKFRVTDPQRVCDVCCVRLESVQPYLMDQVSNAAQLPTHDLTDLSTLRSWVNFP
WGQSMEHEIYKATNTIRGYITKVGILKPEKSIPDSILRDAKGLAIISVMKVGVMVTYNIG
TGLVIARREDDTWSPPSAISSFGLGWGAQAGGELTDFIIILRTNDAVKTFSGNAHLSIGA
GVSAAVGIVGRTVEADVRAGDGGYAACYTYSCSKGAFVGCSLKGTVVTTRGRENARFYGS
QSITATDILLGSMPRPPAAAILYRALSDLYNTLS
NT seq
1545 nt
NT seq
+upstream
nt +downstream
nt
atggagggctccaatcaaaattcgggctttgattctaggatttcttctctttccctaacc
gatgatacagttaatcggagctccaactcgggttttgataatcaaggagttaatgtttat
ggagaatatgataatgggttatcaatgccaaccaacactatggaggacttgaatgatgaa
aaagaaaaagaaccaaggaccagccatcaaaaaatgggaaaatacttcttctacgactct
ccccttgttgaggataccggagtatggataccggtctcgattcctccaatgctcgaaagc
gatcacgaacaatgggccaaaggttttcattccaatggagattatttccctgaaggtgac
atggggtggggtgagtttttgagtgaagagaaggagttgactatgtgggatgtgattgtc
gagatgatacttgccgcccgtgggaaagtcaacgctttagcttctggtgatattcaacga
tgtggagtttcgtggttatcgagtcatttgcttgagcaagcttggcaagagatggctcag
acgctaaacgaagtgaatttaggtaacgtgaaggaaattctcgatgcagaaccgccaaag
tggttggctgacagtgcggcttccgcttgtatgctgtgtggtgtgaggtttcacccgatc
atgtgttcaagacaccattgtaggttttgtggaggaatattttgtggtgagtgttctaaa
ggaaggagtttaatgccccaaaagtttcgtgtaacagacccgcaacgtgtctgcgatgta
tgctgtgtgcggcttgaatcagtccagccatacttgatggaccaggttagtaatgctgct
cagctgccaacacacgatttgaccgacttgagtactttgagatcttgggttaattttccc
tggggacagtccatggaacatgaaatttataaggcaacaaatacgattcggggttacatt
actaaggttggtatattgaaacctgagaaatccattcccgattccattctccgagatgca
aaaggccttgccataatctctgttatgaaagtcggtgtcatggttacatacaatatcggt
acaggacttgtgattgctcgtagagaggatgacacctggtctccaccctctgccatttcc
tcattcggtttgggatggggagctcaggctgggggagaattgaccgattttattataatc
ttgagaacaaatgatgctgttaagacttttagcggcaatgcacatctttctattggagct
ggtgtaagtgctgccgttggtattgttggacggactgtagaagcagatgtacgagccggc
gatggtggttatgctgcttgttatacatacagctgtagtaaaggtgcttttgttggatgt
tcactcaaagggactgttgttacaacacggggacgagagaatgcccgattttacggcagc
cagtcaataactgcaaccgatatacttctcgggtccatgcctcggccacctgccgccgcc
attctttaccgtgcgctttctgatctatataacacactaagttga
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