Gossypium hirsutum (upland cotton): 121219398
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Entry
121219398 CDS
T04793
Name
(RefSeq) glutamate receptor 1.2-like
KO
K05387
glutamate receptor, ionotropic, plant
Organism
ghi
Gossypium hirsutum (upland cotton)
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ghi04040
]
121219398
Ion channels [BR:
ghi04040
]
Ligand-gated channels
Glutamate (ionotropic)
121219398
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GFIT
Motif
Pfam:
ANF_receptor
Lig_chan
SBP_bac_3
Lig_chan-Glu_bd
Peripla_BP_6
Motif
Other DBs
NCBI-GeneID:
121219398
NCBI-ProteinID:
XP_040953421
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Position
D07:12009284..12015124
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AA seq
792 aa
AA seq
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MIKNQILLLFAFYFSLLGELSGKGGGLGPAVDSEEVDVGLIVDMGSREGKVIHGRVSMAI
SDFNSFGRDNQMRIVLHTRDSKGDPLLALSSAFNLGENNKVKVIFSAQKLTLEAKSLAEF
GNNTKIPVIPISAPYLIQVPLHNHAEVKGIIAFAELHEWEKVILIYEDHNDNHWSDFFEE
KKFQVAYKSSVAASSEDEYIIEELHRLKAMETSVFVVHVEPVLASRIFVHAKRLGMASQG
YAWIVTSKCMNHLQNLKDYSSISENMQGFIGFRSYKMKGSKEFDMLQLMNFITQMVNFEI
VNVLGTEGERRVGFWTGKFTNKLSHGFAHGRHLFSSSGFETIIWPGGTSTIPKGRRMQTS
SKTLRIAVPKSNGFPQLLKVDIDLQANISFSGFCIEVFKAAMAGLEHKVPYEFVPFEYNK
THIGEAYSDLVYQVYLQKYDAAVGDITITSNRSLYVDFTLPFTDMGIGMVSRLTPKENQN
LWIFLKPLTPGLWLTIVGVYVLSALFIWLIERPAPVEQQTGQSNGEIGRMFGFSFSIFVF
AHWEKLSSNLSRSVVVLWVFVLFILGSNYTATLTSMMTVQQIEFNTGKSIVGRGAGPVAQ
GAIGNPNFPNSHSKSIRLTSLEEYVKALSEGSKNGGVSAIIEEMPYINVMVEKYPTRYSK
VGHVMPTTNGFGFAFRKGSPITHDISREIAKLREDGTLQRLENEWFKNPIIDFDSRNTSD
SVNPLTVRDFGGLFFINGIFLAITCFLFLTSLLYKNIHVMKEWGRLVKQYICMKIFKNKR
DANAVHPELDNL
NT seq
2379 nt
NT seq
+upstream
nt +downstream
nt
atgataaagaaccaaattttgctcttatttgctttctactttagtctcctcggtgaacta
agtggcaaaggtggtggccttggacctgcggtggacagcgaagaggttgatgttgggtta
atcgttgatatgggatcgagggaggggaaagttatccatggccgcgtttccatggcgatt
tccgatttcaatagctttggcagggacaaccaaatgaggatagttctccatacaagagac
tccaaaggggaccctttgcttgctttatcttccgcttttaatctcggggaaaataacaaa
gtcaaggtcatcttcagtgcgcaaaaattaacattggaagcaaagtctttggctgaattt
gggaataacaccaaaattccagtaatcccaatttccgccccatacttgattcaagttcca
ctacataaccatgccgaagtgaaaggaattattgctttcgcagaattacatgaatgggaa
aaggttatcctcatttacgaagatcataatgacaatcattggagtgatttctttgaagag
aaaaagtttcaggttgcatataaaagctcagtggctgcttcatcggaagatgaatacata
attgaagagcttcataggctcaaagcaatggaaacttcggtattcgttgtgcatgttgaa
cctgtcttagcatctcgtattttcgtacacgcgaaaaggctaggaatggctagccaaggg
tatgcatggatcgttacctccaagtgcatgaatcacttgcagaatttgaaagattattca
tcgatatccgaaaacatgcaaggattcattggtttcaggtcttataagatgaaaggatca
aaggagtttgatatgctacaactgatgaacttcattactcaaatggtcaatttcgaaata
gtgaatgtgttaggtactgaaggggaaagaagagttggattttggacaggcaaattcacc
aacaaattatcacacgggtttgcccatggaaggcatttattttcaagctccggcttcgaa
acaataatctggcctggtgggacatcaaccattcccaaaggtcgaaggatgcaaacgagc
agtaagaccctaaggattgctgttccaaaatcaaacggtttccctcaattgctgaaagtg
gacattgatcttcaggccaatatcagcttctctggtttctgcatagaagttttcaaagct
gcaatggcgggtttggagcataaagtgccctatgagttcgtccccttcgaatataataag
acacacatcggtgaggcgtatagtgatcttgtctaccaagtatatctccagaagtacgat
gctgctgttggggacataacgatcacatcaaatagatcattgtacgtggattttactttg
ccgtttacggacatggggatcgggatggtttctcggctaaccccaaaggagaaccaaaac
ttgtggattttcttgaaaccactcacaccaggtctttggcttacaattgtgggagtttat
gtcttatcagctttatttatttggctgattgaacgccctgcacctgttgaacaacaaacc
gggcaatcaaatggggaaattggaaggatgtttggcttctccttctctatctttgttttt
gcacattgggagaaattatcgagcaacttgtcgagatcagtagttgttttgtgggtgttt
gtgctgttcatattgggctcgaattacaccgccactttgacatcaatgatgacggttcaa
cagattgagttcaacactgggaagagcatcgtaggacgtggagcaggtcctgttgcccaa
ggagctattggcaatccaaatttcccgaattcacattcaaaatctatcaggcttacttca
ctcgaagaatatgtgaaggctttatcggaaggaagtaaaaatggtggagtctctgcgata
attgaggagatgccatacatcaacgtcatggtagaaaaatatccaactcgttattccaag
gtcggtcacgtcatgcctaccaccaatggctttggctttgcatttcgaaaaggttcaccc
ataactcatgacatatcaagggaaattgcaaaactaagagaagacgggacgcttcaaagg
cttgaaaatgagtggttcaaaaatccgatcattgattttgattcacgtaatacttcggac
agtgtgaatccacttacagtaagggattttggaggcttgttctttattaacggaattttt
ttagctataacctgtttcttgttcctcacttctttgctttacaaaaacatccatgttatg
aaagaatggggacgacttgtgaaacagtacatttgcatgaaaatattcaaaaacaaaaga
gatgccaatgcggtacatccagagttggataatttatga
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