KEGG   Gossypium hirsutum (upland cotton): 121219417
Entry
121219417         CDS       T04793                                 
Name
(RefSeq) SEC12-like protein 2
  KO
K14003  prolactin regulatory element-binding protein
Organism
ghi  Gossypium hirsutum (upland cotton)
Pathway
ghi04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:ghi00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    121219417
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:ghi04131]
    121219417
Membrane trafficking [BR:ghi04131]
 Endoplasmic reticulum (ER) - Golgi transport
  Forward pathways
   Coat protein complex II (COP-II)
    121219417
SSDB
Motif
Pfam: WD40_WDHD1_1st Beta-prop_EML_2 WD40_Prp19 WD40 Beta-prop_WDR5 Beta-prop_THOC3 Beta-prop_WDR3_1st WD40_CDC20-Fz ANAPC4_WD40 Beta-prop_WDR36-Utp21_1st Beta-prop_WDR36-Utp21_2nd Beta-prop_WDR90_POC16_2nd WDR55 Beta-prop_WDR3_2nd Tricorn_2nd EIF3I WD40_MABP1-WDR62_1st Beta-prop_WDR19_1st Beta-prop_EML WD40_MABP1-WDR62_2nd Beta-prop_VPS8 Beta-prop_IFT140_1st KNTC1_N WD40_Gbeta Beta-prop_HPS5 WDR90_beta-prop_4th WD40_like Beta-prop_CAF1B_HIR1 Beta-prop_WDR41 Beta-prop_Vps41 PEP5_VPS11_N Beta-prop_ACSF4 Beta-prop_NUP159_NUP214
Other DBs
NCBI-GeneID: 121219417
NCBI-ProteinID: XP_040953464
UniProt: A0ABM3AF42
LinkDB
Position
D07:13605650..13611418
AA seq 393 aa
MTDTSSDLQKYGVPFYGAGWVPYNHIKSKLASQEKIEEDKKEEKDPTPSNDDEITTPLNY
VVLAGGGGEGRSGIPNAIVVSHVNFTSNSLSDQPVVKHETGSDLPYRMTVHPHGDGIICA
FQQSCRLFEWKESEGNEVHKLGVKVAEKVLIQLEDVGQQLALTFNSEGSVLAVGGEDGSL
RVLKWPSMKIVLNEAQAHSSVKNLDFSCDGKFLVSLGSGLCRIWDVTSSKVVASLAKGND
EVFAFCRFAQINDKNPHLYIAAVTDYGGSILTYNTTTWKRIRTSRVVREAISAFNVSSDG
KFLAVGTVGGDLFIINSANMRVQMMVKKAHLGLVTALTFSPDSRALVSASLDSSARLTLI
KDKTSSGGMTWMIILMVLLAIAVYFMKEKGIIP
NT seq 1182 nt   +upstreamnt  +downstreamnt
atgacagacacctcctccgatctccaaaaatacggcgtgccgttttacggagccggatgg
gttccttacaaccacatcaaatccaagctcgcctcacaagaaaagattgaagaggataag
aaagaagaaaaagatccaactccatccaacgatgacgagatcactacacccctaaactac
gtcgttctcgctggcggtggcggtgaaggccgtagtggcattcccaatgcaatcgttgtt
tcccacgttaatttcacctccaattctctctctgatcaacctgtggttaagcatgaaact
ggttctgatttgccttatcgaatgactgttcatccgcatggagatggcattatctgtgcc
tttcaacagagctgcaggttgtttgagtggaaagaatctgagggaaatgaagtccacaaa
ctgggtgtcaaggtagcagagaaagttctgatccagttagaggatgttgggcaacagttg
gcactgacatttaatagtgagggttccgtactggctgttggtggcgaggatggcagttta
agggttttgaagtggcctagcatgaaaatagttctcaacgaagcccaggctcattcttct
gttaagaacttggattttagctgtgatggaaaatttcttgtctcactgggaagtggcctt
tgtaggatttgggatgtaacttcgtcaaaagttgttgcttctctggcaaagggaaatgat
gaggtttttgccttctgcagatttgctcaaattaatgataagaatccacatctgtatatt
gctgcagtcacagactatggtggaagtattttaacatataacacaaccacatggaaaaga
atccgcacaagccgagtagtccgggaagctatctctgcattcaatgtctcgtctgatggg
aagttccttgcagttggaacagtcggaggagacctttttatcataaattctgccaatatg
cgggttcagatgatggttaaaaaagctcaccttggtttggttacagcattgacgttctcc
cctgattcaagggctttggtttctgcatcattggactcaagtgctaggttgaccctaatc
aaggacaagacgagtagtggcgggatgacatggatgatcatattaatggtactacttgct
attgctgtgtattttatgaaggagaaaggaattataccctaa

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