Gossypium hirsutum (upland cotton): 121219417
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Entry
121219417 CDS
T04793
Name
(RefSeq) SEC12-like protein 2
KO
K14003
prolactin regulatory element-binding protein
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
121219417
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ghi04131
]
121219417
Membrane trafficking [BR:
ghi04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
121219417
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_WDHD1_1st
Beta-prop_EML_2
WD40_Prp19
WD40
Beta-prop_WDR5
Beta-prop_THOC3
Beta-prop_WDR3_1st
WD40_CDC20-Fz
ANAPC4_WD40
Beta-prop_WDR36-Utp21_1st
Beta-prop_WDR36-Utp21_2nd
Beta-prop_WDR90_POC16_2nd
WDR55
Beta-prop_WDR3_2nd
Tricorn_2nd
EIF3I
WD40_MABP1-WDR62_1st
Beta-prop_WDR19_1st
Beta-prop_EML
WD40_MABP1-WDR62_2nd
Beta-prop_VPS8
Beta-prop_IFT140_1st
KNTC1_N
WD40_Gbeta
Beta-prop_HPS5
WDR90_beta-prop_4th
WD40_like
Beta-prop_CAF1B_HIR1
Beta-prop_WDR41
Beta-prop_Vps41
PEP5_VPS11_N
Beta-prop_ACSF4
Beta-prop_NUP159_NUP214
Motif
Other DBs
NCBI-GeneID:
121219417
NCBI-ProteinID:
XP_040953464
UniProt:
A0ABM3AF42
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Position
D07:13605650..13611418
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AA seq
393 aa
AA seq
DB search
MTDTSSDLQKYGVPFYGAGWVPYNHIKSKLASQEKIEEDKKEEKDPTPSNDDEITTPLNY
VVLAGGGGEGRSGIPNAIVVSHVNFTSNSLSDQPVVKHETGSDLPYRMTVHPHGDGIICA
FQQSCRLFEWKESEGNEVHKLGVKVAEKVLIQLEDVGQQLALTFNSEGSVLAVGGEDGSL
RVLKWPSMKIVLNEAQAHSSVKNLDFSCDGKFLVSLGSGLCRIWDVTSSKVVASLAKGND
EVFAFCRFAQINDKNPHLYIAAVTDYGGSILTYNTTTWKRIRTSRVVREAISAFNVSSDG
KFLAVGTVGGDLFIINSANMRVQMMVKKAHLGLVTALTFSPDSRALVSASLDSSARLTLI
KDKTSSGGMTWMIILMVLLAIAVYFMKEKGIIP
NT seq
1182 nt
NT seq
+upstream
nt +downstream
nt
atgacagacacctcctccgatctccaaaaatacggcgtgccgttttacggagccggatgg
gttccttacaaccacatcaaatccaagctcgcctcacaagaaaagattgaagaggataag
aaagaagaaaaagatccaactccatccaacgatgacgagatcactacacccctaaactac
gtcgttctcgctggcggtggcggtgaaggccgtagtggcattcccaatgcaatcgttgtt
tcccacgttaatttcacctccaattctctctctgatcaacctgtggttaagcatgaaact
ggttctgatttgccttatcgaatgactgttcatccgcatggagatggcattatctgtgcc
tttcaacagagctgcaggttgtttgagtggaaagaatctgagggaaatgaagtccacaaa
ctgggtgtcaaggtagcagagaaagttctgatccagttagaggatgttgggcaacagttg
gcactgacatttaatagtgagggttccgtactggctgttggtggcgaggatggcagttta
agggttttgaagtggcctagcatgaaaatagttctcaacgaagcccaggctcattcttct
gttaagaacttggattttagctgtgatggaaaatttcttgtctcactgggaagtggcctt
tgtaggatttgggatgtaacttcgtcaaaagttgttgcttctctggcaaagggaaatgat
gaggtttttgccttctgcagatttgctcaaattaatgataagaatccacatctgtatatt
gctgcagtcacagactatggtggaagtattttaacatataacacaaccacatggaaaaga
atccgcacaagccgagtagtccgggaagctatctctgcattcaatgtctcgtctgatggg
aagttccttgcagttggaacagtcggaggagacctttttatcataaattctgccaatatg
cgggttcagatgatggttaaaaaagctcaccttggtttggttacagcattgacgttctcc
cctgattcaagggctttggtttctgcatcattggactcaagtgctaggttgaccctaatc
aaggacaagacgagtagtggcgggatgacatggatgatcatattaatggtactacttgct
attgctgtgtattttatgaaggagaaaggaattataccctaa
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