KEGG   Gossypium hirsutum (upland cotton): 121219555
Entry
121219555         CDS       T04793                                 
Name
(RefSeq) E3 ubiquitin-protein ligase RNF4-like
  KO
K22651  E3 ubiquitin-protein ligase RNF4 [EC:2.3.2.27]
Organism
ghi  Gossypium hirsutum (upland cotton)
Brite
KEGG Orthology (KO) [BR:ghi00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:ghi04121]
    121219555
Enzymes [BR:ghi01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     121219555
Ubiquitin system [BR:ghi04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    121219555
SSDB
Motif
Pfam: zf-C3HC4_2 zf-RING_2 zf-C3HC4 zf-RING_UBOX zf-RING_5 zf-C3HC4_3 zf-C3HC4_4 zf-rbx1 Zn_ribbon_6 zf-RING_10 zf-RING_4 zf-ANAPC11 TerY_C Prok-RING_4 zf-Nse Sina_RING TRAF3_RING zf-RING_6 Zn_ribbon_RlmA YacG
Other DBs
NCBI-GeneID: 121219555
NCBI-ProteinID: XP_040953799
LinkDB
Position
D07:complement(54207259..54210595)
AA seq 204 aa
MNTIESRGPSLRGYQWRKVVLDLNAPPCEIIEQEGTSEQVGLKEVACQPVHPASPATIDV
EVIDDDVTESSATAFAEAKNNSRRSSGRIVVDLDSGWLTRSANNNQNKHRRPPSSQTVIN
CDHYINLESTPQFTVKEILKPQPPPTFNCPICMGPLTEEMSTRCGHIFCKACIKAAIAVQ
RKCPTCRKKVTVKELFRVFLPSAC
NT seq 615 nt   +upstreamnt  +downstreamnt
atgaacactattgaatcgaggggtccttctcttagaggatatcaatggaggaaggtagtg
ctggatctaaatgctcctccctgtgaaatcatagaacaggagggtacttcagaacaggtt
ggcctcaaggaagtggcctgccaacccgtacatcctgcatcacctgctacaattgatgtt
gaagttattgatgatgatgtaactgaaagttctgctacagcatttgcagaggctaaaaac
aactcaaggaggagcagtggaaggattgttgttgatctagattcaggatggctgactagg
tcagctaataataatcagaacaaacatagaagacctccttcaagccaaacagttatcaat
tgtgatcattacattaatttggaaagcacgccgcaatttactgtcaaggaaattctaaag
ccgcaaccacctccaaccttcaattgtccaatttgtatgggtccattaaccgaggagatg
tcgacaaggtgtggacacatattctgcaaggcatgcattaaagctgcaatagctgtccag
agaaaatgcccaacttgcaggaaaaaagtcactgtgaaggaactatttagggtcttcctt
ccatctgcctgttaa

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