KEGG   Gossypium hirsutum (upland cotton): 121219915
Entry
121219915         CDS       T04793                                 
Name
(RefSeq) pre-mRNA-splicing factor 18-like
  KO
K12817  pre-mRNA-splicing factor 18
Organism
ghi  Gossypium hirsutum (upland cotton)
Pathway
ghi03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:ghi00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    121219915
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:ghi03041]
    121219915
Spliceosome [BR:ghi03041]
 Complex C
  Other components
   Step II factors
    121219915
SSDB
Motif
Pfam: Prp18 PRP4 Miga
Other DBs
NCBI-GeneID: 121219915
NCBI-ProteinID: XP_040954605
LinkDB
Position
D08:61679792..61682479
AA seq 415 aa
MDLLKEELLKKRQSLAQETGGRRVFKRSEIEQKQIQKLREQEKRELEAKSRRQSNASSSA
ANDASAKSNPSASSTVSATATSAAGSSKSLTDERNIDDLDLPKQEVIRRLRFLKQPVTLF
GEDDAARLDRLKYVLKAGLFEVDSDMTEGQTNDFLRDIAELRKRQKTGIVSERKRKDREE
GGGGEDGDGGGGEEELSGDGGSSGVDMDKDLKRMKANFDELCGEDKILVFFKRLLNEWNQ
ELDEMGEAEKRTAKGKSMVATFKQCARYLNPLFKFCRKKVLPDDIRQALLVVVECCMKRD
YLAAMDQYIKLAIGNAPWPIGVTMVGIHERSAREKIYTNSVAHIMNDETTRKYLQSIKRL
MTFCQRRYPTLPSKAVEFNSLANGSDLQSLLAEEKFSGGNSSEERHRLMPAPKEN
NT seq 1248 nt   +upstreamnt  +downstreamnt
atggatcttctcaaagaagagcttctcaagaagcggcaaagcttagctcaggaaaccggc
ggcaggcgcgtatttaaacgctccgagattgagcagaagcaaatccagaagcttcgcgag
caagaaaaacgcgaactcgaagctaaatctcgccgtcaatcgaacgcctcttcctccgct
gcgaacgacgcttccgctaaatccaatccttccgcttccagtactgtctccgcgaccgcg
acttccgccgccggttcttccaaatccctcaccgatgaacgaaatatcgatgacctcgac
cttccgaagcaagaagtcattcgccgacttcggttcctcaaacagcctgtcactcttttt
ggggaagacgatgcggctcgtctcgacaggttgaagtacgtcttaaaagctggacttttc
gaagtcgatagcgatatgaccgagggtcaaactaatgatttcttgagagacatagcggag
ttgcggaagcggcagaagacggggatcgtgagcgagaggaagaggaaggatagggaggaa
ggtggtggaggagaggacggggatggaggcggcggagaagaagagctgagtggtgatggt
ggatcaagcggagtcgatatggacaaggacttgaaaagaatgaaggcgaatttcgatgag
ttgtgtggtgaagataagattctggtgtttttcaagaggttgttgaatgagtggaatcaa
gagctggatgagatgggcgaggctgagaaaaggacggcgaaaggcaagtccatggtcgcc
acgtttaagcagtgcgctcgttatttgaatcccttgttcaagttttgtaggaagaaggtt
cttcccgatgatatccgtcaagcattattggtggtggttgagtgttgcatgaagcgggac
tacctagccgcaatggaccagtacattaaattggctatcggtaatgcaccctggccaatt
ggtgtcactatggttggtatccacgaacgttcagctcgtgagaagatctacaccaacagt
gttgcacacataatgaatgacgagacaactcggaaatacttgcaatcaatcaaaagattg
atgaccttttgtcaacgccgttaccctacactcccatctaaagcagtcgagttcaacagc
ttggccaacggtagtgacttacagtcactgctcgcagaagagaagttttctgggggtaat
tcttcagaggaaaggcataggttaatgcctgctccaaaggaaaactag

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