Gossypium hirsutum (upland cotton): 121219979
Help
Entry
121219979 CDS
T04793
Name
(RefSeq) protein EXPORTIN 1A-like isoform X1
KO
K14290
exportin-1
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi03008
Ribosome biogenesis in eukaryotes
ghi03013
Nucleocytoplasmic transport
ghi03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
121219979
03008 Ribosome biogenesis in eukaryotes
121219979
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
121219979
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ghi03019
]
121219979
03009 Ribosome biogenesis [BR:
ghi03009
]
121219979
03016 Transfer RNA biogenesis [BR:
ghi03016
]
121219979
03036 Chromosome and associated proteins [BR:
ghi03036
]
121219979
Messenger RNA biogenesis [BR:
ghi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
121219979
Ribosome biogenesis [BR:
ghi03009
]
Eukaryotic type
Pre-40S particles
Export and cytoplasmic maturation factors
121219979
Pre-60S particles
121219979
Transfer RNA biogenesis [BR:
ghi03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
121219979
Chromosome and associated proteins [BR:
ghi03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
121219979
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CRM1_C
Xpo1
CRM1_repeat_2
CRM1_repeat_3
CRM1_repeat
IBN_N
mTOR_dom
Motif
Other DBs
NCBI-GeneID:
121219979
NCBI-ProteinID:
XP_040954844
LinkDB
All DBs
Position
D08:66485686..66498438
Genome browser
AA seq
1076 aa
AA seq
DB search
MAAERLKDLSQPIDVPLLDATVAAFYGTGSKEERATADQILRYLQNNPDMWLQVVHILQQ
TKSLNTKFFALQVLEGVIKYRWNVLPVEQRDGMKNYISEVIVQLSSNEASFRAERLYVNK
LNIILVQILKHDWPARWQSFIPDLVAAAKTSETICENCMAILKLLSEEVFDFSRGEMTQQ
KIEELKQSLNSEFQLIHELCLYVLSASQRIELIRATLSTLHAFLSWIPLGYIFESTLLET
LLKFFPVPSSRNLTLQCLTEVASLNFGDYYNVQYVKMYNIFMVQLQTILPPTTNIPEAYA
HGSGEEQAFIQNLALFFTSFYKFHIRVLESSQENISALLMGLEYLINISYVDDTEVFKVC
LDYWNSLILELFDSHHNMGNPAVTANMMGLQVPLLPGIVDGLCAQLLQRRRLYAGIMSKL
RMLMICRMAKPEEVLIVEDENGNIVRETMKDNDVLVQYKIMRETLIYLSHLDHEDTEKQM
LKKLSKQLSGEDWTWNNLNTLCWAIGSISGSMMEEQENRFLVMVIRDLLNLCEITKGKDN
KAVIASNIMYVVGQYPRFLRAHWKFLKTVVNKLFEFMHETHPGVQDMACDTFLKIVQKCK
RKFVIVQVGENEPFVSELLSALATTVADLEPHQIHSFYESVGHMIQAESDPHKRDEYLQR
LMALPNQKWGEIIGQARQSVDFLKDQDVIRTVLNILQTNTSVASSLGTYFLSQISLIFLD
MLNVYRMYSELISSSIAEGVPFASKTSYVKLLRSVKRETLKLIETFLDKAEDQPQIGKQF
VPPMMDPVLGDYARNMPDARESEVLSLFATIINKYKAAMIDDVPRIFEAVFQCTLEMITK
NFEDYPEHRLKFFSLLRAIATHCFPALIQLSSQQLKLVMDSIIWAFRHTERNIAETGLNL
LLEMLRNFQASEFCNQFYRTYFLTIEQEIFAVLTDTFHKPGFKLHVLILQQLFCLVENGL
LTEPLWDAATVPLQYPNNEMFVREYTIKLLTTSFPNMTAAEVTQLVNGLFDSRNDLPTFK
NHIRDFLVQSKEFSAQDNKDLYAEEAAVQREKERQRMLSIPGLIAPNEIQDEMLDS
NT seq
3231 nt
NT seq
+upstream
nt +downstream
nt
atggcggctgagaggcttaaggatttgagtcagccgattgatgtaccattacttgatgct
accgttgcagctttttatggcaccggatctaaagaagagagagcaactgcagatcagatc
ttacgatatctgcaaaataatccagatatgtggcttcaagttgtgcacatcctgcagcag
acaaagagcctgaataccaagttctttgccttgcaggttcttgaaggtgttatcaagtat
aggtggaatgtgttgcctgttgagcagcgagatggaatgaaaaattacatttctgaagtc
attgtccagttgtcaagtaatgaggcctccttccgagcagaaaggctgtatgtcaacaag
cttaatatcatactggttcagatcttaaagcatgattggcctgctaggtggcaaagcttc
attcctgatcttgttgcagctgcgaaaactagtgaaacaatatgcgaaaattgtatggca
atactgaaacttctaagcgaagaagtttttgatttctcaagaggtgaaatgactcaacag
aaaatcgaagagcttaaacaatcactgaacagtgagtttcaactcattcatgagttatgc
ttatacgtgctatcagcttctcagagaatagagcttatacgggctacactatccaccttg
cacgcgtttctttcctggattcctctgggctatatttttgaatcaactttgttggaaact
ctcctaaagtttttccctgtgccatcatctcggaatctcacactccaatgtttaacagag
gttgcatccctaaactttggggactattataatgtgcagtatgttaagatgtacaatata
ttcatggtccagctgcagactattttgccaccaactacaaacatccctgaggcttatgca
catggaagcggtgaggaacaggcattcattcagaatttggcactgttcttcacttcattc
tacaagtttcacattcgggtgctagagtcttcacaagaaaatatttctgcgctgttaatg
ggtctggaatatcttatcaacatatcttatgtggatgacacagaggtctttaaggtttgc
ttggactattggaactccttgatcttggagctatttgactcacatcataacatgggcaat
cctgctgtaactgcaaacatgatgggactgcaggtacctttgcttcctggtattgttgat
ggcctttgtgcccagcttctgcaacgacgccgactttatgctggtataatgtcaaagtta
agaatgcttatgatctgtcgtatggctaagcctgaggaggttctgatagttgaagatgaa
aatggcaacattgttcgagagacaatgaaagataatgatgttcttgttcaatataagatc
atgagggagactttgatctatttgtctcacctagatcacgaggatactgaaaagcagatg
ctaaagaaattgagcaagcaattgagtggtgaggattggacttggaacaatttgaacaca
ttatgttgggcaataggatctatttctggttccatgatggaagagcaggaaaataggttt
ttggtgatggtcattcgtgacttgctgaatttgtgtgaaatcactaaagggaaagacaat
aaagctgttattgctagtaacataatgtatgttgttggacagtatccaaggtttttaagg
gctcactggaagttcctgaaaactgttgtgaataagctgtttgagttcatgcatgaaaca
catcctggagttcaggatatggcctgtgacacattcttgaaaattgttcagaaatgcaag
cgaaagtttgtgattgttcaggttggagaaaatgaaccatttgtttctgaacttctatct
gctcttgcaacaacagttgctgatctagagcctcatcagattcattccttttatgaatct
gttggtcatatgattcaagcagaatctgatccccataagagggatgaatacttgcagaga
ctgatggcacttcccaaccagaaatggggtgaaattatagggcaggcacgtcaaagtgtt
gacttccttaaagatcaggatgtgataagaactgtgctgaacatactgcagacaaatact
agtgtggccagttctcttggaacatatttcttatctcagatttctttaatattcctggac
atgctcaatgtgtacagaatgtacagtgagcttatatcaagcagtattgcagaaggtgta
ccctttgcttcaaaaacatcctatgtgaaacttctacgatctgttaagagggagactctt
aagctcattgagacatttttagacaaggcagaagatcaaccgcaaattgggaaacaattt
gtgcccccaatgatggatccagttcttggtgattatgctaggaatatgccagatgctaga
gagtctgaagttttatcactttttgctacaataataaacaagtacaaagctgcaatgata
gatgatgttccccgtatatttgaagctgttttccagtgcacgctggagatgataaccaaa
aattttgaagattacccggaacatcgcctcaagttcttttcattgcttcgtgccatcgct
actcattgtttccctgcacttattcagttgtcaagtcagcaactaaagctggttatggat
tcaatcatttgggcatttcggcatacagagaggaatattgcagaaactggtttaaatctt
ctattggagatgctgagaaactttcaggcttctgaattttgtaaccagttctatcgaaca
tactttttgacaattgagcaagaaatatttgccgtcttgacagacacatttcacaaacct
ggcttcaagttgcatgtcttgattttacagcagctgttctgcctggttgagaatggttta
ttgactgagcccttgtgggatgctgctacggttccacttcagtatccaaataatgaaatg
tttgttcgtgaatacacaataaaacttcttactacatcattccccaacatgactgcagcc
gaggtcactcaattagtgaatggactatttgactcgagaaatgatttgccaacatttaag
aatcacatacgggattttcttgtgcaatcaaaagaattttcagctcaggacaataaagat
ctctatgcggaagaggctgctgtacagagggaaaaagagcggcaacggatgctttcaatc
ccaggtctcatagccccaaacgaaatacaagacgagatgttggactcttag
DBGET
integrated database retrieval system
