Gossypium hirsutum (upland cotton): 121220225
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Entry
121220225 CDS
T04793
Name
(RefSeq) E3 ubiquitin-protein ligase SP1-like
KO
K15688
E3 ubiquitin-protein ligase MUL1 [EC:
2.3.2.27
]
Organism
ghi
Gossypium hirsutum (upland cotton)
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ghi04121
]
121220225
Enzymes [BR:
ghi01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
121220225
Ubiquitin system [BR:
ghi04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
121220225
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Gene cluster
GFIT
Motif
Pfam:
GIDE
zf-C3HC4_3
Prok-RING_4
zf-RING_2
ERCC4
Motif
Other DBs
NCBI-GeneID:
121220225
NCBI-ProteinID:
XP_040955559
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All DBs
Position
D08:complement(5638617..5644234)
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AA seq
342 aa
AA seq
DB search
MVPWGGLTCCLSAAALYLLGISSGRDAQILKTVTRVNQLKELAQLLDIESKVIPLIVTIS
GRVGSETPINCEHSGLRGVIVEETAEQHFLKHNDAGSWIQDSALMLSMSKEVPWYLDDGT
GRAYVVGARSAAGFALTVGSEVFEDSGRSIVRGTLDYLQGLKMLGVKRIERVLPIGSSLT
VVGEAVKDDVGTIRIQKPHKGPFYVSPKSIDQLISNLGKWARLYKYASFGLTIFGAFLIT
KHAILYFLERRRRRELQRRVLAAAAKRSGPDNEDPTLKVENGAEPKRDRMMPNICVICLE
QEYNAVFIQCGHMCCCTTCASHLTSCPLCRRRIEQVVKVFCH
NT seq
1029 nt
NT seq
+upstream
nt +downstream
nt
atggttccgtggggcggcctcacttgctgcttgagtgcagccgctctttatcttcttgga
atcagcagtggcagggatgcacagattctcaagacggtcactcgagtcaatcagcttaag
gaattggctcaattgctagacattgaaagtaaagtgattcctctaatcgttacaatctcc
ggaagagttggttctgagaccccaattaattgtgaacatagtggattaagaggtgttata
gtagaggaaacggccgagcagcattttctaaagcacaatgatgctggttcttggatacaa
gattctgctttgatgctttctatgagtaaagaggttccatggtacctggatgatgggacg
ggtcgtgcatatgtagttggtgcccgcagtgcagcaggttttgcactaactgttggaagt
gaagtttttgaagattcaggccgatcaattgtacgtggaacattagactatctccaaggt
ctcaagatgcttggagtcaagagaatagagcgtgtgcttcccattggttcttccttgact
gttgttggtgaggctgtcaaggatgacgttggaacaattcggattcagaaaccccataaa
ggaccattttatgtgtcccccaaatctattgatcaactcatttccaaccttggaaagtgg
gctagattgtacaagtatgcttcgtttggactgaccatctttggcgccttcctaatcacc
aagcatgcaatcctttatttcttggagagaagacgccgacgtgaattgcagcgaagggtt
cttgctgctgcagctaagagatcagggccagataatgaagatccaactttgaaagttgaa
aacggagcagaacccaagagagatcgcatgatgccaaatatatgtgtaatatgcctcgag
caagagtacaatgccgtttttattcaatgtggccatatgtgctgctgtacaacctgcgct
tcgcacttaaccagttgccctctttgccggaggcgtattgagcaggttgtaaaagtcttt
tgccattga
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