Gossypium hirsutum (upland cotton): 121220814
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Entry
121220814 CDS
T04793
Name
(RefSeq) transcription factor MYB108-like
KO
K09422
transcription factor MYB, plant
Organism
ghi
Gossypium hirsutum (upland cotton)
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ghi03000
]
121220814
Transcription factors [BR:
ghi03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters Myb, Myb-factors
121220814
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myb_DNA-binding
Myb_DNA-bind_6
Myb_DNA-bind_7
HTH_CHD1_Hrp3
Motif
Other DBs
NCBI-GeneID:
121220814
NCBI-ProteinID:
XP_040956273
UniProt:
A0ABM3ANL6
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All DBs
Position
D09:complement(32649277..32651642)
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AA seq
289 aa
AA seq
DB search
MDVKARSSSGPNMVSTEEEDLKRGPWTIEEDFKLINYISIHGKGRWNSLAHSAGLKRTGK
SCRLRWLNYLRPDVRRGNITLEEQLLILQLHSRWGNRWSKIAQFLPGRTDNEIKNYWRTR
VQKHAKQLKCDINSKKFKDTMRYLWMPRLVERIQAATTTTNTASTSAATTSNASIEQMML
PNLSYYTPDNASTTASSDSIGTQVSPISDSIDYYNGVSTNYNPNQDYLQANHESLISPIG
SYCNNGDGMDFGLMELNHHWASDGDGDGSHNLLNAEDFFFLQHQFNFNM
NT seq
870 nt
NT seq
+upstream
nt +downstream
nt
atggatgttaaagcaaggagtagtagtggtccaaacatggtaagtactgaagaagaggac
ttgaaaagaggtccttggactattgaagaagattttaaacttatcaactatatttccatt
catggcaaaggtcgatggaactctcttgctcattctgcaggtcttaaacgaactggaaaa
agttgtaggttgagatggttgaattatcttcggcctgatgtccgacgtgggaacatcaca
cttgaggaacaacttttgattcttcaacttcactcgcgatggggaaatcgatggtccaaa
atcgcccaattcttgcccggaagaaccgacaacgagatcaagaactattggagaactcgt
gtccaaaaacatgccaaacaactcaaatgtgacatcaacagcaaaaaattcaaggacacc
atgcgttacctatggatgcctaggttagttgaaaggattcaagctgccaccaccaccact
aacaccgcgtccacttcggctgccacgacgagcaatgcgagcattgagcaaatgatgttg
cctaatctgagttattacactccggacaacgctagcactactgcctcatcagactctatc
gggactcaagtttcaccaatttcagattcaattgattattacaatggtgtctcgactaat
tataacccaaatcaagattatttgcaagctaaccatgaatccttaataagtcccattggg
agttattgcaacaatggcgatggcatggattttgggttgatggagttgaaccaccattgg
gcaagtgatggtgatggtgatggatcgcataatttattgaacgctgaagattttttcttc
ttacagcaccagttcaactttaacatgtga
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