Gossypium hirsutum (upland cotton): 121220862
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Entry
121220862 CDS
T04793
Name
(RefSeq) tRNA dimethylallyltransferase 2-like
KO
K00791
tRNA dimethylallyltransferase [EC:
2.5.1.75
]
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi00908
Zeatin biosynthesis
ghi01100
Metabolic pathways
ghi01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00908 Zeatin biosynthesis
121220862
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
ghi01006
]
121220862
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ghi03016
]
121220862
Enzymes [BR:
ghi01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.75 tRNA dimethylallyltransferase
121220862
Prenyltransferases [BR:
ghi01006
]
Compound prenylation
tRNA dimethylallyltransferase
121220862
Transfer RNA biogenesis [BR:
ghi03016
]
Eukaryotic type
tRNA modification factors
Other tRNA modification factors
121220862
Prokaryotic type
121220862
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
IPPT
IPT
AAA_33
Cytidylate_kin
AAA_16
nSTAND3
SF3a60_Prp9_C
AAA_25
Adeno_IVa2
RsgA_GTPase
AAA_22
Zeta_toxin
AAA_28
PhoH
ATPase_2
Motif
Other DBs
NCBI-GeneID:
121220862
NCBI-ProteinID:
XP_040956459
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All DBs
Position
D09:complement(37719079..37723111)
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AA seq
532 aa
AA seq
DB search
MRGSSPTYGGINRIGFVLGSVCEDATNIKPTKKLHAFLTFANCLPREQRLWREMDNSSES
PATTLNSNNGGEPIMEEHKPKLVVIMGPTGSGKSRLAIDLATHFPIEIINADSMQVYQGL
DVLTNKVPLREQNGVPHHLLGTVSSDVEFTANKFRDSAIPIISDILSRNHLPVIVGGTNF
YIQAVVSSFLLDESVEDMSETYSRDHPGNEQTNHMPDILGDSCNYSYDLLKELDPVAADR
IHPNNHRKINLYLSLYARSGVLPSKLYQGKAAENWGRVDNSRYRCCFICIDAALPVLDQY
VEHRVDCMIDAGLLNEVYDIYNPNGNYTLGLRQAIGVREFENFLQAYFSDSLDDETSDSS
DGTLLKLSTRIDDKLFKENTRGILNSSCDNPQKVLLEEAIDKVKANTRRLVRRQKRRVNQ
LQTLFGWNISYVDATESISKKSDECWAVQVVGPAVKMIRSFLNKDDSNGQTPDGESKTST
DTVQRDLWTQYICKACGDRILRGAHEWEQHKQGRGHRKRMLSLRKSRSSSLA
NT seq
1599 nt
NT seq
+upstream
nt +downstream
nt
atgaggggctccagtccaacttatggcggcataaataggataggatttgtgttgggctct
gtttgtgaggatgccacaaacatcaagcccaccaaaaagctacatgcttttctgaccttt
gcaaattgcctgccgagagagcagagactttggagagagatggacaacagcagcgagtcg
cctgctacaaccctaaactcaaacaatggaggagaacccataatggaagaacataaacct
aagctggtagtaataatgggtccaactggctctggaaaatcacgtttagccatcgattta
gccacccattttcctatcgaaatcatcaacgctgattccatgcaagtctatcaaggtctt
gatgtcctcaccaataaagtccccctccgtgaacaaaatggagtgccacatcatcttttg
ggtactgttagctcagatgtggaattcacggctaacaagttcagggattctgctattcct
attattagtgacatattatctcgcaaccatttgccagtcattgttggaggcaccaatttc
tatattcaggcagttgtgagttcgttccttcttgatgaatcagtagaagatatgtctgaa
acctactcaagggaccatcctggaaatgagcagaccaatcatatgcctgacatccttgga
gacagttgcaattatagctatgatcttcttaaagaacttgatccagttgcagcagacaga
attcatccaaataatcatagaaaaattaatctataccttagtctttatgctcgttctggt
gttcttcccagcaaactttatcagggaaaggctgcagagaactggggccgagttgataat
tctagatatcgttgctgttttatatgcatcgatgctgccttacctgtgctggaccagtat
gtggaacacagggtagactgcatgatagatgctggtttgctcaatgaagtgtatgacatt
tacaatccaaatggaaattatactctaggtttgcgacaggccataggtgttcgagaattt
gagaattttcttcaggcttacttttctgacagcttggatgatgagacaagtgattcttct
gatggaactcttctaaagctgtcaacaaggattgatgataaattgttcaaagaaaatact
aggggaatactaaattcctcttgtgataacccccaaaaagttctgttagaagaagccatt
gacaaagtaaaagcaaacacccggagacttgttcgtcgtcaaaaaaggagggtcaatcaa
cttcagacattgtttggatggaatattagttatgttgatgcaacagaatctatatcaaag
aaatcagatgagtgttgggcagtgcaagtggttggacctgctgtgaaaatgattagatca
ttcctcaataaagatgatagtaatgggcaaactccggatggtgaaagtaaaacttcaacg
gatacagtccagagggacttgtggactcaatacatatgcaaggcctgcggagataggata
ctaagaggagcccatgagtgggaacaacataaacagggtcgtgggcatcgaaaacggatg
ttgagccttcgaaagtctcgaagttcctcactggcatag
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