Gossypium hirsutum (upland cotton): 121221069
Help
Entry
121221069 CDS
T04793
Name
(RefSeq) serine protease SPPA, chloroplastic-like
KO
K04773
protease IV [EC:3.4.21.-]
Organism
ghi
Gossypium hirsutum (upland cotton)
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ghi01002
]
121221069
Peptidases and inhibitors [BR:
ghi01002
]
Serine peptidases
Family S49: protease IV family
121221069
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_S49
NfeD1b_N
SDH_protease
CLP_protease
ECH_1
Motif
Other DBs
NCBI-GeneID:
121221069
NCBI-ProteinID:
XP_040957419
LinkDB
All DBs
Position
D09:complement(54094079..54103699)
Genome browser
AA seq
683 aa
AA seq
DB search
MSKILFFQTVHSTPRIHPRIVTSILSKPLIIPSVSKCYSPIFPFHSISLPALKHHFHSPS
FSFPSSFPTRAFDDSSSSIETQNEKEEKVGEQSEIEEYPSGEMEYEKISGWKSFVVKLKM
LIAFPWQRVRKGSVLTMKLRGQISDQLKSRFSSGLSLPQICENFVKAAYDPRISGVYLHI
EPLNCGWGKVEEIRRHILNFKKSGKFIIAYTPACGEKEFYLACACEEIYAPPSAYFSLYG
LTVQASFLGGVLEKIGIEPQVERIGKYKSAGDQLTRKSMSEENCEMLTSLLDNIYGNWLD
VVSSSKGKKREDVEHFINEGVYEVEKLKEEGFITNIHYDDEVISMLKERLGVQKDKKLSM
VDYKKYSKVRKWTLGLTGGKDLIAVIRATGSISRVRSPLSTPSSGIVAEQIIEKIRSVRE
SKRYKAVIIRIDSPGGDALASDLMWREIKLLAASKPVIASMGDVAASGGYYMAMAAQTIV
AENLTLTGSIGVVTGKFNLGKLYEKIGFNKEVISRGRYAELLAAEQRPFRPDEAELFEKS
AQNAYKQFRDKAAFSRSMPVEKMEEVAQGRVWAGKGAASRGLVDAIGGLSRAIAIAKHKI
KIPQDRPVTLVELSRPSPTLPEVLSGIGSSIVGVDRTVKELLQDLTFSDGVQARMDGIMF
QRLEGFPNATPLISLIKDYLSSL
NT seq
2052 nt
NT seq
+upstream
nt +downstream
nt
atgtctaaaattttattcttccaaactgttcattcaacgcccagaatccatcccagaatt
gttacttccatcctctcaaagcctcttataatcccatcagtttccaaatgttactctccc
atctttccatttcattccatttctttgccagctcttaaacaccatttccatagcccaagc
ttttcgttcccttcttcttttccaactcgagctttcgatgattcttcgtcttctatcgag
acccaaaatgaaaaagaagaaaaagttggtgaacaatcggagatcgaagagtatcctagt
ggggaaatggagtatgagaaaattagtgggtggaagagtttcgttgttaagttaaagatg
cttattgctttcccttggcaaagggttcgaaaaggcagtgttttgactatgaaactgcgt
ggccagatatctgatcagctaaagagccgtttctcttcaggactatctctgccacaaatt
tgtgagaattttgtaaaagctgcatacgatcctcgcatttccggtgtctatctccacata
gaacctttgaactgcggatggggaaaagttgaagaaatccgaaggcatattttgaacttt
aagaaatcaggtaaattcatcattgcttacacccctgcatgtggggagaaagagttttac
ctcgcttgtgcatgtgaagagatttatgcaccaccaagtgcttatttttctttgtatggt
ctgactgttcaagcttcattccttggaggagttcttgagaaaattggaattgaaccacag
gttgaaaggattggtaaatacaaaagtgctggggaccaacttacacggaaaagtatgtct
gaagaaaattgcgagatgcttacttcattgcttgataacatatatgggaattggctggat
gtagtttcctcttcaaaaggaaagaaacgagaagatgttgagcactttattaatgaaggg
gtctatgaagtagaaaagctaaaagaggagggattcataacaaatatacattatgatgat
gaggttatctcaatgttgaaagaaaggcttggtgtccagaaggataaaaagctttctatg
gttgattacaagaaatactccaaagttaggaagtggactctcggtttaacaggtggtaaa
gacctaatagctgtgatcagagctactgggagcattagccgtgtgcggagtccattaagt
acgccaagttctggtatcgttgcagagcaaatcattgagaagattcgtagtgtccgagaa
tcaaaaagatacaaggctgttatcatacgaattgacagccccggaggtgatgctcttgct
tcagatttaatgtggagggaaatcaaacttttagctgcatcgaaacccgtcattgcatcc
atgggtgatgtggctgctagtggaggatattatatggctatggcagctcaaactattgtt
gctgaaaatttgactttaactggttcaattggagttgttacagggaagtttaacttgggg
aaactatacgaaaaaataggattcaataaggaggtcatttcaaggggaagatatgctgaa
cttcttgcagctgagcagcgacctttcaggccagatgaagccgagctttttgagaagtct
gcgcagaatgcttataaacaatttcgagacaaggctgcgttttcaagatcaatgcctgta
gaaaagatggaagaggttgcacaaggtagagtctgggcaggtaaaggtgcagcatcacgt
ggtttggttgatgctattgggggactttctcgggctatcgccattgcaaaacataaaatc
aagataccacaagacaggcctgttaccctcgttgagttatcaagaccatcgccaacacta
ccagaggtgttaagtgggatagggagctccatagtcggagtagaccgaacggtaaaagaa
cttttgcaagacttgacgttttccgacggggttcaagctcggatggacggaattatgttc
cagagattggagggatttcccaatgctaccccactcatcagtttgataaaagattacctc
agttcactttga
DBGET
integrated database retrieval system
