Gossypium hirsutum (upland cotton): 121221084
Help
Entry
121221084 CDS
T04793
Name
(RefSeq) phytoene synthase 2, chloroplastic-like
KO
K02291
15-cis-phytoene synthase [EC:
2.5.1.32
]
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi00906
Carotenoid biosynthesis
ghi01100
Metabolic pathways
ghi01110
Biosynthesis of secondary metabolites
Module
ghi_M00097
beta-Carotene biosynthesis, GGAP => beta-carotene
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00906 Carotenoid biosynthesis
121221084
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
ghi01006
]
121221084
Enzymes [BR:
ghi01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.32 15-cis-phytoene synthase
121221084
Prenyltransferases [BR:
ghi01006
]
Terpene biosynthesis
Squalene/phytoene synthase
121221084
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SQS_PSY
Motif
Other DBs
NCBI-GeneID:
121221084
NCBI-ProteinID:
XP_040957487
LinkDB
All DBs
Position
D09:2164739..2167676
Genome browser
AA seq
389 aa
AA seq
DB search
MAGVLLWVVCPKGNATALLSLIPRSGKHKRCRVHQKVKFSTGVSAISSAVANPARSSEEK
VYDVVLKQAALVKEQRGKKPLDLGTRTETDGFTDWDLLNEAYGRCGEVCAEYAKTFYLGT
LLMTPERRRAVWAIYVWCRRTDELVDGPNASHITPRALDRWEKRLDDLFEGRPYDMLDAA
LSDTVSKYPVDIQPFKDMIEGMRLDLRKSRYMNFDELYLYCYYVAGTVGLMSVPVMGIAP
ESKASVESVYNAALALGIANQLTNILRDVGEDARRGRIYLPQDELAQFGLSDDDIFRGQV
TDKWRNFMKDQIKRARMFFDEAEKGVSELNAASRWPVWASLLLYRQILDVIEENDYNNFS
KRAYVGKVKKFASLPVAYGRALMGTSKLF
NT seq
1170 nt
NT seq
+upstream
nt +downstream
nt
atggctggtgttcttctttgggtggtatgtcccaaagggaatgccacagctttacttagc
ttgataccaaggagtgggaagcataaaaggtgtagggtacatcaaaaggtgaagttttct
actggggtttcagctatttcaagtgcagtggctaacccagcacgatcttcagaagagaag
gtttatgatgtggttttaaagcaagctgctttggttaaagaacaaagggggaaaaaacct
ttggatttaggaacaagaactgaaactgatggattcactgattgggatcttttgaatgaa
gcttatggtcggtgtggtgaagtatgtgctgaatatgctaagactttctatttgggtaca
ttacttatgacaccagagcgtcggagagctgtgtgggcgatttacgtttggtgtaggaga
acagatgagcttgtggatggacctaatgcttcacatattacaccaagggcacttgaccga
tgggagaaaagattagatgatcttttcgaaggtcgaccttatgatatgctcgatgccgct
ttatccgatactgtctcaaagtaccctgtagatatacagccattcaaggacatgatagaa
ggaatgagattagatttaaggaagtccagatatatgaattttgatgagctctatctttac
tgctactacgttgccgggacagttggactaatgagtgttccggtaatggggattgcacct
gaatcaaaagcatcggtggagagtgtctataatgccgcattagccctcggaattgctaat
caacttactaatatacttagagatgttggtgaagatgctaggagaggaagaatatatcta
ccccaagatgaactggcacagttcggactgtcggacgatgacatatttcgtggacaagta
acggataagtggaggaacttcatgaaagatcagataaaacgagcgaggatgttcttcgac
gaggcagaaaagggtgtttccgagctaaatgcggcaagcagatggccggtgtgggcatca
ttgttgctgtatcgacagatattagacgtcattgaagaaaatgattataacaatttcagc
aaaagagcgtatgtagggaaagtaaagaaatttgcttcactacctgtggcatatggaaga
gcacttatgggcacttccaaattgttctga
DBGET
integrated database retrieval system
