Gossypium hirsutum (upland cotton): 121222518
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Entry
121222518 CDS
T04793
Name
(RefSeq) U-box domain-containing protein 14-like
KO
K27628
U-box domain-containing protein 12/13/14 [EC:
2.3.2.27
]
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
121222518
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ghi04121
]
121222518
Enzymes [BR:
ghi01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
121222518
Ubiquitin system [BR:
ghi04121
]
Ubiquitin ligases (E3)
U-box type E3
121222518
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Arm
U-box
ARM_ARMC5
HEAT_2
zf-RING_UBOX
KAP
MLKL_N
Arm_2
zf-Nse
zf-C3HC4_4
ARMC9_ARM
zf-C3HC4_2
zf-C3HC4
zf-RING_2
MCAfunc
zf-rbx1
Motif
Other DBs
NCBI-GeneID:
121222518
NCBI-ProteinID:
XP_040959437
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All DBs
Position
D10:complement(60588197..60592024)
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AA seq
637 aa
AA seq
DB search
MIMGLTGDSKGQLLSQLAELVKEISGLPECRNSCKKMHGTLVRRIKLLSPLFEELRDGNE
ESMVKIEEIKGFELLKSALDSTKKLLQSINEGSKLHQALQKDQVAYKFQQMTETIEAALS
EIPYDKLDISEEVQEQIELVHAQFRRAKGRPESPDLQLEHDLSIVQKEKDPDPAILKRLS
DKLQLRTINDLTKESVALHELVITSGEDPGERIEEMASLLKKLKDFVLTENPEADTSEGE
KGLMKHRSPVIPDDFRCPISLELMKDPVIVSTGQTYERSCIQKWLDAGHKTCPKTQQTLL
HTALTPNYVLKSLIALWCESNGVELPKKQGTCRSRKAGSSASDCDRTAIIALLEKLANGN
SEQQRAAAGELRLLAKRNADNRVCIAEAGAIPLLVELLSCTDPRTQEHAVTALLNLSIND
SNKGTIVNAGAIPDIVDVLKNGSMEARENAAATLFSLSVIDENKVAIGAAGAIPALIKLL
CEGSPRGKKDAATAIFNLSIYQGNKARAVRAGIVPPLMRLLKDAGGGMVDEALAILAILA
SHHEGRAAIGQADPIPVLLEVIRTGSPRNRENAAAVLWSLCTSNLEQLKIAKDFGAEEAL
KDLSETGTDRAKRKAGSILELLQQLEVKEDAVSLSSL
NT seq
1914 nt
NT seq
+upstream
nt +downstream
nt
atgatcatgggactcacaggtgattcaaagggacaattgctgagtcaactagctgagttg
gtgaaggagatatctggtttaccagagtgtagaaactcgtgtaaaaaaatgcatgggact
ttggttcgtagaatcaagttgttgagccctttgtttgaagaattgagagacggaaatgag
gagtcgatggtgaaaattgaagagattaaagggtttgagctactgaaatctgctttggat
tctactaaaaagcttcttcaatcgattaatgaaggaagcaagttgcatcaggccctgcaa
aaggatcaggtagcgtataagttccagcaaatgacggaaaccattgaagcagctttgagc
gaaatcccctatgataaacttgatatatcggaagaagtccaggaacagattgaacttgtt
catgcacaattcagaagagcaaaaggaagaccggagtcaccagatttacaactagaacat
gatttatcgatagtgcagaaagaaaaagatcccgaccctgcaattctcaaaaggctttca
gataagttgcagctaaggacaatcaatgatctaacgaaagagtcggttgctctccacgaa
ctggttattacaagtggtgaagatccaggagagcgcattgaggagatggcatcactgctc
aagaagcttaaagattttgtcctgactgaaaatcctgaagctgacacctctgagggcgaa
aagggcttgatgaaacacaggtcacctgttatcccagatgatttccggtgtccaatatct
cttgagttgatgaaagaccctgtaattgtctccactggacagacatatgaaagatcctgt
attcagaaatggttggatgctgggcacaagacgtgtccgaaaacacagcagacactattg
cacactgcccttacgccaaactacgtcctaaaaagtctcatagctttgtggtgcgagagc
aatggtgttgagctgcctaagaaacaagggacttgtagaagcagaaaagccggtagcagt
gcctcggactgtgatcgtactgctatcatcgctttattggaaaaactggcaaatggaaat
tcagaacaacaaagagcagctgctggtgaactccggttattggcaaaaagaaatgcggat
aatagggtttgtattgctgaggcaggagccataccacttcttgtcgagttattgtcttgc
acagatcctcgaacccaggagcatgctgtgactgctcttctcaacctttccattaatgac
agtaacaagggaaccatcgttaacgcaggagctatacccgatatagttgatgtgttgaaa
aatggcagcatggaagctagagaaaatgctgccgctacccttttcagcttatccgttata
gatgagaacaaggtagcgataggtgctgccggggctattcctgcccttataaagctgctt
tgtgaagggtctccaagaggaaagaaagatgccgctactgccattttcaatctttcaatc
taccaaggaaacaaggcaagggctgttagggctggtattgtgccgccattgatgagactg
ttgaaggatgctggaggtgggatggtggatgaagcattggcaattcttgccattcttgca
agccatcacgaagggagggcggcaatcggtcaggctgacccaattcctgttttactagaa
gtcatacggactggttctccacgtaaccgggagaatgccgccgccgtactctggtcactt
tgcaccagtaacttagaacaattaaaaatagccaaggatttcggtgcagaggaggcatta
aaggacctgtcagaaactggcactgacagagcaaaaagaaaagctggaagtatcttggaa
ctcctccaacaacttgaagtgaaggaagacgcggtttctttaagttctttatga
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