Gossypium hirsutum (upland cotton): 121222529
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Entry
121222529 CDS
T04793
Name
(RefSeq) auxin response factor 18-like isoform X1
KO
K14486
auxin response factor
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
121222529
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Motif
Pfam:
Auxin_resp
B3
AUX_IAA
Motif
Other DBs
NCBI-GeneID:
121222529
NCBI-ProteinID:
XP_040959451
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Position
D10:61111472..61114700
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AA seq
685 aa
AA seq
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MITVMDSRKEVVKNSEKCLDPQLWHACAGGMVQMPSVNSKVFYFPQGHAEHANGNVDFGN
LPIPSLVLCRVSAVRFMADPETDEVYAKIMLVPLRENSFGVEDDGFDGNVGVENPEKSAS
FAKTLTQSDANNGGGFSVPRYCAETIFPRLDYNAEPPVQTILAKDVHGEVWKFRHIYRGT
PRRHLLTTGWSNFVNHKKLVAGDSIVFLRADNGDLCVGIRRAKRGLGGGHEFPGWNSASG
TSGSQIGSYSPFLREGESKLMRKDCNGDPRGRVRADSVIEAASRAASGQPFEVVYYPRTS
TPEFCVKASSIRAAMQIQWYPGMRFKMPFETEDSSRISWFMGAISTAKVVDPIRWPNSPW
RLLQVAWDEPDLLHNVKRVSPWLVELVTNIPAINLNPFSPPRKKMRLPQHPDISFLNQIP
MPSFSGNSFRSSSPMRCITDNIPGGIQGARHEPFGLSSSDLRSNKLHSGLFPSGFHQLDR
TAPPTRLSGDNFCSDNANNTNISSLLTIGNPTQSLKQSNDSKTPHIVLFGQLIFCEQRAS
QSCSGDTVGNSSSDGNTEKTAISSDGTGSVLHQNVRENSSDEGFPWCKEHQKTDLGLETG
HCKVFMESENVGRTLDLSVLGSYEELFGKLANMFGIESSEMLSSVLYRDAAGSVKNTGDE
PFSEFMKTARRLTILMDSSSDNLER
NT seq
2058 nt
NT seq
+upstream
nt +downstream
nt
atgataacagtcatggattctaggaaagaagttgtgaaaaattcagaaaaatgcttagat
cctcagctatggcatgcttgtgctggtggtatggtacaaatgccatcagtgaactctaag
gtgttctatttccctcagggtcatgctgagcatgccaatgggaatgtagattttgggaat
ctcccgattccgtcactcgtcttgtgtcgggtttccgccgttaggtttatggcggatccc
gaaaccgatgaggtttatgctaaaatcatgttggttcctttgagagagaacagttttggg
gttgaagatgatggttttgatgggaatgttggggtggagaaccctgaaaaatctgcttcc
tttgctaagacattgactcagtctgatgctaacaacggtggggggttctcggttccgcgg
tattgcgcggagactatatttcctaggttggattataatgctgaaccccctgttcagact
attcttgctaaggatgttcatggtgaggtttggaaatttaggcatatatatagggggacg
cctcgtcgacatcttttgacgacggggtggagtaatttcgtgaaccacaagaagcttgtg
gctggtgattcgattgtgtttcttagagctgataatggagatctttgtgtggggattcgt
agggcgaaaagaggacttgggggtggacatgaatttccgggatggaactctgcgagtgga
acctctggttcacaaattgggagttattctccgtttttgagggagggggagagtaaattg
atgaggaaggattgtaatggggatccaaggggaagagtaagggctgactccgtgattgaa
gctgcgagtcgtgcagctagtgggcagccctttgaggtcgtttactatccacgaactagc
actcctgagttctgcgtgaaggcctcatccattagagctgcaatgcaaatccagtggtat
cctgggatgaggttcaaaatgcctttcgaaactgaggactcttcacggattagctggttc
atgggagcgatatctactgctaaggttgtcgatcccatccgttggcctaattctccatgg
cgactactgcaggtagcatgggatgagccagatttactccacaatgtgaagcgtgttagc
ccatggttggttgaattggtcacaaacataccagctattaatcttaatcctttctcgcca
ccaaggaaaaagatgcggcttccacaacacccagacatttcctttcttaaccaaattcca
atgccatcattttccgggaactctttcagatccagcagccccatgcgttgcattactgac
aacattcctggaggtatacagggagccaggcatgaaccgttcggattatcttcatcagat
ctccgctccaacaagctgcattcaggtctgtttccatctggttttcatcaacttgatcgt
actgccccacctactagactttccggcgacaacttttgtagcgacaacgcgaacaatacc
aatatatcttccttgttgacaataggaaatccgacccagagtttgaaacaaagcaatgat
agcaagacaccccatattgtattgttcggtcaactcattttctgtgagcagcgggcttct
cagagctgctcaggtgatacagttggaaacagttcatcagatgggaatacagagaagact
gctatttcctctgatggaactggatctgtgttacatcaaaatgttcgggaaaattcttcg
gatgaagggtttccttggtgcaaagagcatcaaaaaactgatctaggattggagactggt
cattgcaaagtgtttatggaatcagagaatgtaggtagaacccttgatctttcagttctg
ggatcatatgaagagctgtttgggaagctggccaacatgtttggcatagaaagttcagag
atgctgagcagtgtgctctaccgcgatgctgccggttcagttaaaaacactggagatgag
cccttcagcgagtttatgaagacagcaaggaggctaacgattctcatggattcaagcagt
gacaacttagaaagatag
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