Gossypium hirsutum (upland cotton): 121222575
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Entry
121222575 CDS
T04793
Name
(RefSeq) DNA topoisomerase 2-like isoform X1
KO
K03164
DNA topoisomerase II [EC:
5.6.2.2
]
Organism
ghi
Gossypium hirsutum (upland cotton)
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ghi03032
]
121222575
03036 Chromosome and associated proteins [BR:
ghi03036
]
121222575
Enzymes [BR:
ghi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
121222575
DNA replication proteins [BR:
ghi03032
]
Eukaryotic type
DNA Topoisomerases
121222575
Chromosome and associated proteins [BR:
ghi03036
]
Eukaryotic type
Chromosome condensation proteins
Other regulators of chromosome condensation
121222575
Centrosome formation proteins
Centriole proteins
121222575
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
TOPRIM_C
DNA_gyraseB
Toprim
HATPase_c
Motif
Other DBs
NCBI-GeneID:
121222575
NCBI-ProteinID:
XP_040959529
LinkDB
All DBs
Position
D10:complement(64180174..64186820)
Genome browser
AA seq
1462 aa
AA seq
DB search
MVADSKLPLQSSNNVNTKASKTIEETYQKKTQLEHILLRPDTYIGSIEQHTQRLWVYEND
EMVHRDIKYVPGLYKIFDEILVNAADNKQRDPSMDSIKVVIDAEQNLISVYNNGDGVPVE
IHQEEKVYVPELIFGHLLTSSNYDDNVKKTTGGRNGYGAKLTNIFSTEFVIETADGKRQK
KYKQVFKNNMGNKTEPLITKCKEGENWTKVTFKPDLAKFNMTHLEDDVVALMRKRVFDLA
GCLGKTVKVELNGKRIAVKSFLDYVNLYLSAASKNKSEPLPRISEKVNARWEVCVSLSEG
QFQQVSFVNSIATIKGGTHVDYVTNQISNYVMNAVNKKNKNANVKAHNVKNHLWVFVNAL
IDNPAFDSQTKETLTLRQSSFGSKCELPEDFLKKVAKSGVVDNLLQWAEFKHSKDLKKTD
GTKSGSIRGIPKLDDANEAGGRNSDKCTLILTEGDSAKSLAVAGLSVVGRNHYGVYPLRG
KLLNVREASHKQLMENAEIQNLKRILGLQQNKEYTDVKSLRYGHLMIMTDQDHDGSHIKG
LLINFIHSFWPSLLKVKSFMVEFITPIVKATRKVNKQEEELCFYTMPEYQAWKESLGTNA
KSWRIKYYKGLGTSTGPEGKKYFKDIDKHMKEFVWEGDMDGDAIELAFSKKKIEARKNWL
RQFEPGTHLDHNEKLINYSDFINKELILFSMADLQRSIPSMVDGLKPGQRKILFCAFKRN
FVHEAKVSQFSGYVSEHSAYHHGEQSLCSTIVGMAQDFVGSNNINLLRPGGQFGTRNQGG
KDAASARYIFTNLTTITRYLFRKDDDGLLNYLNEDGQSIEPSWYVPIIPMVLVNGSEGIG
TGWSSYIPNYNPRDIVANVRRLLNGEPMEPMHPWYRGFKGTIEKTASKESGVTYTISGIV
EEVDETTLKITELPLRRWTQDYKEFLESVITANDSFIKEFKQYSDDRTVHFEVFMTEENM
MLAKQEGLMKKFKLTTTVSTSNMHLFDSRGMIKKYDTPEEILDEFYHLRLEFYEKRRKHM
LDTLELELLKMDNKVRFILDVVKGNIIVNNRKRADLFLELQEKGFTPFPKKTKAVEVAVA
GDIDHEGEPELSPEATRASDYDYLLSMAIGTLTLEKVQELCSDRDKLEHEVEELRKHTPK
SLWLKDLEELEKQLDEQDQADLEAEEENSKNRAKGGVAGKKARRPVAPKNPKKVNKKDDP
QVSEASEISSTTAMEAEKAPAVVKPKGRAGAKKKTKKQDDSDDDDDDDDDFDIPDLRERL
AKHNIDSSPDHSADMETEMFQEPAGKKGPAKRAAATKKNPVISLSESIGEINISDGELEV
VEPAPAATKKGGRKPAAPKASKPPAAAKKRGPAAGKQQKLLTQMLKPAAEAEGSGISPEK
KVRKMRASPFNKKSGSVLGKTSSSSLSSMPEIDSDEDEEVAVVVEPRARPQRANRTKTTY
VVSDSETEEEVNDDSDFEEDED
NT seq
4389 nt
NT seq
+upstream
nt +downstream
nt
atggttgcagattcgaagctcccgctgcaaagcagcaacaatgtaaacactaaagcctca
aaaactatagaggaaacctaccaaaagaagacccaattagaacacatccttctccgaccc
gatacctacatcggttccattgaacagcacactcagcgcctatgggtgtacgagaacgat
gagatggtccaccgagacataaagtacgtcccgggactttacaagatcttcgacgagatc
ttagtcaatgccgccgataataaacaacgggatccatccatggattccattaaagtggtg
attgatgcggagcagaacttgatttccgtttacaataacggggatggagttcccgttgag
attcatcaggaggagaaggtttatgttccggagttgattttcggccatttgttgactagc
agtaactatgacgacaatgttaaaaagacgaccggtgggagaaatgggtacggagctaag
cttacgaatatattttcgactgagtttgttatcgaaactgctgatggaaaacggcagaag
aagtataagcaggtatttaaaaacaacatgggaaacaaaactgagcctcttataacaaaa
tgtaaagagggtgagaattggacaaaggttacatttaagcctgacttggccaaatttaac
atgactcacttggaggatgatgtggttgcattgatgaggaagagggtgtttgatttagct
ggttgtcttggcaagaccgtcaaggttgagttgaatgggaaacgcatcgccgtgaaatca
tttcttgattatgtcaacctttaccttagtgctgcctctaaaaataagagcgagcctctc
ccaaggatttctgagaaggttaatgcaagatgggaagtttgtgttagtctcagcgaaggg
cagtttcaacaggtcagctttgtcaatagtattgctacaatcaagggtggaacccatgtt
gactatgttaccaaccagatatctaattatgtgatgaatgctgtaaataagaagaacaag
aatgctaatgtcaaagcacataatgtgaagaatcatctgtgggtttttgtcaatgctctt
attgacaaccctgcttttgattcgcaaaccaaggaaactttgactcttcgtcagagcagt
ttcggctccaaatgtgaacttcctgaagattttttgaagaaagttgcaaaatctggagtt
gtggataatttgctccagtgggcagaattcaagcatagcaaagatcttaagaagactgat
ggaactaagtcaggaagtattcgaggaatccccaagctagatgatgctaatgaagctgga
ggaaggaattctgacaaatgcacattgatattgacggaaggggattcagcaaaatctctt
gctgtggctggtctttctgttgtaggtcgaaaccactatggtgtttacccattgagaggt
aaactactgaatgtgagggaagccagccataagcagttaatggagaatgctgaaatacag
aatcttaagcgaattcttggattgcagcagaacaaggagtatactgatgtcaaatctttg
agatatgggcatttgatgattatgactgatcaggatcatgatggttctcatatcaaaggg
ctgctgatcaattttattcattccttctggccttctttgctaaaagttaaatcattcatg
gttgagtttataactccaatagtgaaggctactcgcaaagtcaacaaacaggaggaggag
ttatgtttttatacgatgcctgaataccaagcttggaaggaaagtttggggactaatgca
aagagctggagaataaagtactataaggggttgggaacaagcacaggacctgaagggaag
aaatacttcaaagatattgataagcacatgaaagagtttgtatgggaaggtgatatggat
ggtgatgcaatcgagcttgcttttagtaagaagaagatagaagcgaggaagaattggctg
cgacagtttgagcccggcacgcaccttgatcacaatgagaaactcatcaattatagcgac
ttcattaataaggaacttattctgttttccatggctgaccttcaaagatcaattccttcc
atggttgatggcctgaagcctggtcaaaggaagatccttttctgtgctttcaagaggaat
tttgtacatgaggcaaaggtttctcaattttcgggttatgtttcggagcattctgcttac
catcatggtgagcagagtctttgtagtaccattgttggaatggcccaggattttgtgggc
agtaacaacataaaccttcttcgtcctgggggtcaatttggtactcgtaaccagggtggc
aaagatgcagcaagtgcaaggtacatttttaccaatcttactaccattactcgatatctg
ttccgcaaggatgatgatggcctgctcaattacttgaatgaagatggccaatccattgag
ccttcctggtatgtacctattataccaatggttctcgtgaacggaagtgaaggaattggg
acaggatggagctcttatatcccgaactataatccaagagatatagtggcaaatgtgagg
cgtttgctgaatggtgaaccaatggagcccatgcatccgtggtaccgaggtttcaaaggg
actattgagaaaactgcgtcaaaagaatctggtgttacctacactataagtgggattgta
gaggaggttgatgagaccacactgaaaataactgaacttccactccgtaggtggactcaa
gattataaggaatttttggaatcagtcataacagcaaatgattcattcatcaaggaattt
aagcaatacagtgatgatagaactgtgcattttgaggtcttcatgactgaagagaacatg
atgttggccaagcaagagggtttgatgaagaagtttaagctaacaacaactgttagcaca
agtaacatgcacttgtttgattcgagagggatgattaagaaatatgacacccctgaggaa
atacttgacgaattttatcacttaaggcttgaattttacgagaaacgaaggaaacatatg
ttggacactcttgaactcgagttattgaaaatggataacaaagtcaggtttatccttgat
gttgttaaggggaacatcattgtgaacaataggaagagagctgacttgttccttgagctg
caagaaaaagggtttactcctttcccgaagaaaacgaaagctgttgaagtagcagtggcg
ggggatattgatcatgaaggggaacctgaacttagccctgaagcaacaagggcaagtgat
tatgactatctcttatccatggcaatcggtactctgacccttgagaaggtccaagagctt
tgttctgatagggataaacttgagcatgaggttgaagagttgaggaaacacactccaaag
tctttatggctgaaagatcttgaagaactcgagaagcaacttgacgagcaagatcaagca
gacctggaagcagaagaagagaacagcaaaaacagagcgaagggaggtgtagctggcaag
aaggctcgaagaccggtggcacctaaaaacccgaagaaggtaaacaagaaagatgaccca
caagtttccgaagcctcagaaatttcgtctacgacggcaatggaagcagaaaaggctcct
gctgttgttaaacccaaaggccgggccggtgcaaagaagaagacaaagaagcaggatgat
agtgatgatgatgatgacgacgacgacgactttgatattcctgatctaagggagcgactt
gccaagcataacatcgattcctctcctgatcattccgctgatatggaaactgaaatgttt
caagaacctgctggaaagaaagggcctgccaaaagggcagctgctactaagaagaatccc
gtcatttctctatccgagagcataggcgaaatcaacatcagcgatggagaattggaggtt
gtcgagccagctccagcagcaacaaagaaaggaggacgaaaaccggctgctccaaaagcc
agtaagccacctgcagcagcaaagaaaagaggtccagcagcgggcaagcaacaaaagctt
ttgacacaaatgctgaaacctgcagcagaagctgagggttcagggatatcgcctgaaaag
aaagtgaggaaaatgagggcgtcaccgttcaacaagaaaagcggttcggtcttggggaag
acgagcagttcttcactgtcttcaatgccggaaatcgatagcgatgaagatgaagaagta
gctgtggttgtggaaccaagagctagaccacaaagggccaaccggaccaagacaacttat
gttgtcagtgattccgagactgaggaagaagttaatgatgactcagatttcgaggaagac
gaggattga
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integrated database retrieval system
