Gossypium hirsutum (upland cotton): 121222629
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Entry
121222629 CDS
T04793
Name
(RefSeq) protein FIZZY-RELATED 3-like
KO
K03364
cell division cycle 20-like protein 1, cofactor of APC complex
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
121222629
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ghi04121
]
121222629
Ubiquitin system [BR:
ghi04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
APC/C
Target recognizing subunit
121222629
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
Beta-prop_THOC3
Beta-prop_WDR3_1st
Beta-prop_WDR5
WD40
WD40_WDHD1_1st
Beta-prop_EML_2
WD40_Prp19
Beta-prop_WDR19_1st
Beta-prop_WDR3_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
Beta-prop_WDR36-Utp21_2nd
EIF3I
Beta-prop_EML
WD40_Gbeta
WD40_MABP1-WDR62_2nd
ANAPC4_WD40
Beta-prop_Aladin
Beta-prop_IFT140_1st
WDR55
WD40_MABP1-WDR62_1st
Beta-prop_WDR36-Utp21_1st
eIF2A
Beta-prop_RIG_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_IFT122_1st
Beta-prop_WDR41
Beta-prop_WDR35_TULP_N
Beta-prop_HPS5
WDR90_beta-prop_4th
Beta-prop_WDR75_1st
Beta-prop_DCAF4
NBCH_WD40
Beta-prop_RIG_1st
Tricorn_2nd
MIOS_WD40
Beta-prop_SPT8
Motif
Other DBs
NCBI-GeneID:
121222629
NCBI-ProteinID:
XP_040959711
UniProt:
A0ABM3AY38
LinkDB
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Position
D10:67066656..67069229
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AA seq
489 aa
AA seq
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MESSQRRKSGLNLPAGMNETSLRLETSSPSSPCSSSFRSISISSPRMISSLSSPSSSKST
ICSDRFIPCRSSSRLHTFGLMEKESPAKEGGNEAYCRILKSELFGSDFGSCFSPAGQGSP
MSPNKNMLRFKTEHSGPNSPYSPSILGHDSGFSSEASTPPKPPRKVPKTPHKVLDAPSLQ
DDFYLNLVDWSSQNVLAVGLGTCVYLWTASNSKVTKLCDLGPNDSVCAVQWTREGSYISI
GTNLGQVQVWDGTQCKKVRTMGGHQTRTGVLAWNSRILSSGSRDRNILQHDLRVSSDYVS
KLVGHKSEVCGLKWSHDDRELASGGNDNQLLVWNQHSQQPILKLTEHTAAVKAIVWSPHQ
SNLLASGGGTADRCIRFWNTTNGHQLNNIDTGSQVCNLSWSKNVNEIVSTHGYSQNQIMV
WKYPSMAKVATLTGHSFRVLYLAMSPDGQTIVTGAGDETLRFWNVFPSMKTPTPVKDTGL
WSLGRTYIR
NT seq
1470 nt
NT seq
+upstream
nt +downstream
nt
atggagtcttcacaaaggagaaaaagtggtttaaacctccctgctgggatgaacgaaact
tcactccggctagaaacttcttccccttcttctccttgttcttcttcttttcgttcgatt
tcgatatcttcaccacggatgatatcgagtttaagttcaccatcatcgtcgaaatcgacg
atttgtagcgataggttcatcccgtgtagatcttcatcaaggctacacacttttgggtta
atggaaaaggaatcacctgctaaagaagggggaaatgaagcttattgtcggattttaaaa
tctgagttgtttggttctgatttcgggtcttgtttttctcctgcaggtcaaggttcacct
atgagtcctaacaagaatatgttgaggttcaaaactgaacattcagggcctaactcacct
tattctccttcaattttggggcatgatagtggtttctctagcgaagcatctacacctcct
aaaccacctaggaaagtccctaagacaccccataaggttcttgatgctccatcacttcaa
gatgatttctatttgaaccttgttgattggtcatctcaaaatgtacttgctgttgggttg
ggtacttgtgtttatttatggactgcatccaatagtaaagtaacaaagttgtgtgatttg
ggaccaaatgatagtgtttgtgctgttcaatggacccgggaaggttcttacatatcgatt
ggtacaaatctcggtcaagttcaggtttgggatggaactcagtgtaagaaagtccgaacc
atgggtggacatcaaacaagaaccggtgtcttggcttggaattcgcggatactgtcatct
ggaagcagggatcgtaacattcttcagcatgatcttcgagtttcgagtgattacgttagc
aagcttgttgggcataaatccgaggtttgtggattgaaatggtcacatgacgaccgtgaa
cttgcttccggtgggaatgataatcagcttttggtttggaaccagcattcacagcaacca
attcttaaattgactgaacatacagccgctgtcaaagccattgtttggtcaccccatcaa
agcaaccttcttgcatcggggggtggaactgcggaccgatgtattcggttttggaacact
actaatggtcaccaattgaacaacatagacacagggagccaagtatgcaatctatcatgg
agtaagaatgtgaatgaaatagttagcactcatggatactctcaaaatcaaattatggtg
tggaaatatccatcaatggcaaaggttgcaacgctaacaggccatagttttcgagtcctc
tacctagccatgtcgcctgatggacagaccatagtgactggtgcaggggatgagacttta
aggttttggaatgtcttcccatctatgaaaacaccaacaccggttaaagatacgggactc
tggtctttaggccgaacctatatacgatga
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