Gossypium hirsutum (upland cotton): 121223045
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Entry
121223045 CDS
T04793
Name
(RefSeq) probable indole-3-acetic acid-amido synthetase GH3.1
KO
K14487
auxin responsive GH3 gene family
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
121223045
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Motif
Pfam:
GH3
GH3_C
GH3_M
AIG2_2
DUF4304
Motif
Other DBs
NCBI-GeneID:
121223045
NCBI-ProteinID:
XP_040959907
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Position
D11:27077670..27080103
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AA seq
606 aa
AA seq
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MISPSSLIMAVDSTLSSAVGASVSEKDAKALQFIEEMTKNVDSVQERILGEILSRNADTE
YLKRFQLNGATDRDTFKSKVPVVTYEDLQPEIQRIANGDKSPILSSHPISEFLTSSGTSA
GERKLMPTIHEELNRRQLLYSLLMPVMNLYVPGLDKGKGLYFLFIKAETKTPGGLLARPV
LTSYYKSDHFKSRPYDPFNVYTSPNETILCPDSIQSMYAQMLCGLIMREEVLRVGAVFAS
GLLKAIRFLQVNWKQFAHDIETGTLNPKVTDPSVRECMSKILKPNPELAAFITKECSEEN
WECIITRIWPNTKYLDVIVTGAMAQYIPTLEYYSGGLPMACTMYASSECYFGLNLKPMCK
PSEVSYTIMPNMAYFEFLPHDDSSAQDSSRDSPPRLVDLADLEVGKEYELIVTTYAGLCR
YRVGDILRVTGFHNAAPQFRFIRRKNVLLSIDFDKTDESELQQAIENASVLLKEFNTSVV
EYTSYADTKQIPGHYVIYWELFVKDAANAPTDEVLSQCCFQMEESLNVVYRQCRVADSIG
PLEIRVVKNGTFEELMDYAISRGASINQYKVPRCVSFTPIMELLDSRVVSKHFSPALPHW
TPERRR
NT seq
1821 nt
NT seq
+upstream
nt +downstream
nt
atgatatctccatcatcattgatcatggctgttgattcaactctctcctccgcagttggt
gcctccgttagtgagaaagacgccaaagctcttcagttcattgaagagatgacaaagaat
gttgattctgttcaagagaggattttaggtgagatcttaagtcgaaatgccgacactgag
tacctcaaacgcttccagctcaatggagctacggaccgagacacattcaagtccaaagtc
cctgttgtcacttacgaggatcttcagcctgaaatccaacgtatcgccaatggtgacaag
tctcctatcttatcttctcaccccatttcagagtttctgaccagttctgggacttcagct
ggagaaaggaagctgatgccaacaattcatgaagagttgaatcgtcgtcaactcttgtat
agtcttctcatgcctgtaatgaatctttacgtgccgggattggacaaagggaagggtctt
tatttcttgtttataaaagctgaaacaaagacccctggagggcttctggcacgccctgtt
cttaccagctactacaaaagcgaccactttaagagcagaccatatgatcctttcaatgtt
tacaccagccccaacgagaccattctttgccccgactcgatccagagcatgtacgcccag
atgctctgcggcttgatcatgagggaagaggtccttcgtgttggtgccgtcttcgcttct
ggcctgctcaaggccattcgtttcctgcaagtcaactggaaacaatttgctcatgacatc
gaaaccggaactttaaaccctaaagtcactgatccttcagttcgtgaatgtatgagcaaa
atcttgaaacctaacccagaacttgctgctttcattaccaaggaatgctcagaggagaac
tgggaatgcatcatcactagaatttggcccaacacaaagtaccttgatgtgatcgtaact
ggagctatggctcaatatattcccacccttgaatattacagtggtggcttgccgatggct
tgcaccatgtatgcatcctcagagtgttattttggtcttaacctcaagccaatgtgcaaa
ccatccgaggtttcatatactatcatgccaaacatggcctattttgagttcttgcctcat
gatgactcgtccgctcaagattcatctcgtgactcacccccacgcctcgttgacctcgcc
gatctagaagttgggaaagaatatgaactcattgtcactacttatgccgggttgtgccgt
tacagagtcggcgatatcctccgagtcaccggtttccacaacgcggccccgcaattccgt
ttcattaggaggaagaacgtgttgctgagcatcgatttcgacaaaaccgacgagtccgag
ttgcaacaggccatcgaaaacgcttccgtcttgctaaaggaattcaacaccagcgttgtt
gagtacacgagctacgcggacaccaaacaaataccaggtcactacgttatctactgggaa
ttattcgtaaaagacgctgctaatgccccaacggacgaagttttgagccagtgctgcttt
caaatggaggaatcattgaacgtagtgtaccgtcagtgccgagttgcagactcaatcggc
ccactggagataagagtagtgaagaacggcacattcgaggagttaatggactatgcaatt
tcaaggggtgcttccattaatcaatacaaagttccaagatgtgtcagcttcactccaatc
atggaacttctcgactcaagggtggtttcaaagcatttcagtccagctttaccacactgg
accccagaacgccgtcgttga
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