KEGG   Gossypium hirsutum (upland cotton): 121223324
Entry
121223324         CDS       T04793                                 
Name
(RefSeq) putative lysine-specific demethylase JMJ16
  KO
K11446  [histone H3]-trimethyl-L-lysine4 demethylase [EC:1.14.11.67]
Organism
ghi  Gossypium hirsutum (upland cotton)
Brite
KEGG Orthology (KO) [BR:ghi00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:ghi01009]
    121223324
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:ghi03036]
    121223324
Enzymes [BR:ghi01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.67  [histone H3]-trimethyl-L-lysine4 demethylase
     121223324
Protein phosphatases and associated proteins [BR:ghi01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     121223324
Chromosome and associated proteins [BR:ghi03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    121223324
SSDB
Motif
Pfam: JmjC FYRC JmjN zf-C5HC2 FYRN KDM5_C-hel Focadhesin
Other DBs
NCBI-GeneID: 121223324
NCBI-ProteinID: XP_040960494
UniProt: A0ABM3B0C0
LinkDB
Position
D11:57231277..57241121
AA seq 1249 aa
MGTELMRVCVKEENDDIPPVPPGFESYASFTLTRGAQENVKHENDNVKYCSASATTISSV
ASPVQKETELGNGESTKITRSVRRRPWINYGRYDNSPEDELDCEKLDQNQRLRHNLPKGV
IRGCPECNDCQKVIARWHPEEACRPGVEDAPVFYPTEKEFEDTLNYIASIRPKAEKYGIC
RIVPPSSWKPPCPLKEKNIWENARFATRVQRVDKLQNRNSMRKMSKVNNSMRRKRRRYMR
MAVDCSSDSGSSWSGDAGFCEVERFGFEPGPEFTLDKFQKYADDFKAQYFRRKENDVDME
GKVSVLPDLHEASVENIEGEYWRIVEKATEEIEVLYGADLETGVFGSGFPKKSSQVGLAS
NEKYINSGWNLNNFPRLPGSVLNYESSDISGVLVPWLYVGMCFSSFCWHVEDHHLYSLNF
MHWGAPKIWYGVPGKDAPKLEEAMKKHLPDLFDEQPDLLHKLVTQLSPSILKSEGVPVYR
CVQNAGEFVLTFPRAYHAGFNCGFNCAEAVNVAPVDWLPHGQIAIKLYREQGRKTSISHD
KLLLGAAREAVKAHWELSLLKKHTSDNLRWKGVCGKDGILAKTLKERVEIERLSREYFCS
SSHIAKMESNFDATSERECSICFFDLHLSAAGCHCSPDRYACLKHAKQFCSCARGSKIFL
FRYDINELNILVEAVEGKLSAIYRWARLDLGLALSSYVTKDNIGGRLSHTLEGVPKEVPQ
PSVISSGELPGEDMSKKKPLILAQISAQMLLLQRNKQSEAALPSKDPNSKLKKGESVLSA
LNLSMPGSQTSMTSGVKKPSAPAVVNTILLSDDEGDEPEKPVSEIPKEHSMKEHPEASVR
VAPAGEKASTCNYKNEAILTTPLTDAAFTNQKDANSPDVQRNNHSSHYSEVKDEHSGNGI
TLLGSSRQNDFCHLESATAESGRNVQDSSNTIEMDNNKNNLLTGESSLQHLLPWGSEKVD
KDKHEKVGAIASANLVDHTRTNVGGPSCSQNNVDRNVRQKGPRIAKVVRRINCNVEPLEF
GVVLSGKLWCNSQAIFPKGFKSRVRYISVLDPTNMAYYVSEILDAERDAPLFMVSVEHCP
SEVFVHVSAARCWEMVREKVNQEITKQHRLGRTNLPPLQPPGSLDGFEMFGFSSPEIVQA
VEAMDRNRVCMEYWDSRPYSRLQVQFLQHSHTPGNGGNFLRTSGEQNNAGAPQNKCLPGE
VDTLLGLFKKASSEELSSLCSILSDKRSPKDVDRVAQLLKEEIRSRRPT
NT seq 3750 nt   +upstreamnt  +downstreamnt
atggggacagaacttatgagagtttgtgttaaagaagagaacgatgatattccaccagtt
ccaccaggtttcgagtcatatgcatcttttactctaacaaggggggcacaagagaatgtg
aaacatgagaatgataatgtaaagtattgttcagcctccgcaaccacaattagttctgtt
gccagtcctgtccagaaggaaactgagttgggcaatggcgaaagcacaaagattacaagg
tctgtgaggcgaagaccttggataaactatggtagatacgataacagtccagaagacgag
cttgattgtgaaaagcttgatcaaaatcaaagattgagacataatcttcctaaaggtgtc
attcgtggatgtccagagtgtaatgattgccaaaaggtgattgcaagatggcatccagag
gaagcatgtaggccaggtgttgaggatgcacctgtgttctacccgacagaaaaggagttt
gaagatactttgaactatatagctagcatacgaccaaaagcggaaaaatatggaatctgt
cgcattgttcctccatcttcatggaaacctccatgtcctctcaaagaaaagaatatatgg
gaaaatgctagatttgctactcgtgtgcagagggttgacaagcttcagaatcgtaattca
atgaggaaaatgtcaaaagttaataacagtatgaggaggaaaaggagaagatacatgaga
atggctgtagactgtagttctgatagtggaagtagctggtctggcgatgccggattttgt
gaagtagagaggtttgggtttgaacccggtccagagtttactctggataaatttcagaag
tatgctgatgatttcaaggctcagtactttaggaggaaggaaaatgatgtagatatggaa
ggtaaagtgtccgttctgcctgatctccatgaagcttcagttgagaatattgagggtgaa
tactggcgcatagtggagaaagcaactgaggaaatagaggtcttatatggggctgatctg
gaaactggggtttttggcagtgggtttcctaagaagtccagtcaagttggacttgcttcc
aacgagaagtacataaattctggttggaacttaaataacttccccaggctacctggatcc
gttctcaattatgaaagcagtgatatttctggggttctggttccctggttgtatgtagga
atgtgcttttcctccttctgttggcatgttgaagatcaccacctatactctttgaatttc
atgcattggggtgctccgaaaatttggtatggcgttcctggaaaggatgctcctaaactg
gaggaggctatgaaaaagcatttgcctgacctttttgatgaacaacctgacctgcttcac
aaactggtcactcagctgtccccttcgatactaaaatctgaaggggtacctgtctatcga
tgtgttcagaatgctggagaatttgttctgacattccctagagcatatcatgcagggttc
aactgtggtttcaattgtgcggaggcagtaaatgtagctcctgttgactggttaccacat
ggacagattgctattaagctataccgtgaacagggaaggaaaacttccatctcacatgat
aaattgttgcttggagcagcaagggaagcagtcaaagcccactgggagctcagtttattg
aagaagcatacttctgataacttaaggtggaaaggtgtatgtggaaaagatggaatttta
gctaaaactctcaaggaacgtgttgagatagagcgtctaagcagggaatatttttgcagt
tcctctcacattgctaaaatggagagcaattttgatgctaccagtgagcgagaatgcagt
atatgtttttttgatttgcacctttctgcagcaggttgtcattgctcccctgatagatat
gcatgcctgaaacatgcaaagcagttctgctcatgtgctagaggttccaaaattttccta
tttcgatatgatataaatgagttaaatatccttgttgaagcagtggaaggaaaactaagt
gcaatatataggtgggcaagactagatcttgggctggccctgagttcatatgtaaccaag
gacaatataggtggtaggttatcccatacattggaaggagtacctaaagaagtgcctcaa
ccatcagtcatttcctccggagaattaccaggagaagatatgtcgaaaaagaaacccttg
atattagctcaaatttctgctcagatgttattgctacaaagaaataaacaatcagaggct
gctttaccatcaaaagatccaaattctaagttgaagaaaggggaatccgttctttctgct
ttaaacttgagcatgcctggaagccaaacttccatgacaagtggagtgaagaagccttca
gctccagcagtcgttaatactattcttcttagtgatgatgaaggtgatgaaccagagaaa
ccagtttcagaaataccaaaagaacattctatgaaagagcatccagaagcctcagtgagg
gtggcaccagctggtgaaaaagcaagcacatgtaattacaagaatgaagctatcttaact
acccctctaactgatgctgcatttacgaatcaaaaggatgccaattcccctgatgtacaa
aggaataatcattcatctcattattctgaagtgaaagatgagcattctggaaatggaatc
acattgctaggatctagtcgccagaatgatttttgccatttagaatctgccactgcagaa
tctggtagaaatgttcaggattcttctaataccatagagatggataataacaagaataat
ctgttgactggtgaaagcagccttcagcatctgctgccttggggaagtgaaaaagttgac
aaggataagcatgagaaggtgggagccattgcctctgcaaatttagttgaccacacaaga
actaatgttggtgggccgtcttgctctcaaaataatgttgacagaaatgtccggcagaaa
ggtcctcgcattgctaaggtagtgcgtaggatcaactgtaatgttgagcctctggaattt
ggagttgtgctctctgggaaattatggtgtaacagccaggccattttcccaaaaggattt
aagagccgggttaggtatattagtgttttagatccaacaaatatggcatactatgtctca
gaaattttggatgcagagagggatgcacctctgttcatggtatctgtggagcactgtccc
agtgaagtatttgttcatgtttcagctgccagatgctgggagatggtgagggagaaagtg
aatcaagagataacgaaacaacatagactaggaaggaccaacctccctccattgcagcct
cccggcagccttgatggctttgagatgtttggtttttcttcaccagaaattgtgcaggcc
gttgaggcaatggatcgcaatcgagtttgtatggagtattgggactctcggccttactct
cggcttcaagtgcagttcctacaacattctcatacccctggtaatggtggcaactttctt
agaacatctggggaacaaaataatgcaggggctcctcagaacaaatgcctgcccggtgaa
gtcgacacactactaggtttattcaagaaggcaagctctgaagaattaagctcactttgt
agcatattaagtgacaaaaggtctcccaaggatgtagaccgtgtggctcaactacttaag
gaggagattcgcagtcgtcgacctacatga

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