Gossypium hirsutum (upland cotton): 121224116 Help Entry 121224116         CDS       T04793                                  Name (RefSeq) ATP-dependent helicase BRM-like   KO K11647   SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4 [EC:5.6.2.-] Organism ghi  Gossypium hirsutum (upland cotton) Pathway ghi03082   ATP-dependent chromatin remodeling Brite KEGG Orthology (KO) [BR:ghi00001]  09120 Genetic Information Processing   09126 Chromosome    03082 ATP-dependent chromatin remodeling     121224116  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:ghi03021]     121224116    03036 Chromosome and associated proteins [BR:ghi03036]     121224116 Transcription machinery [BR:ghi03021]  Eukaryotic type   RNA polymerase II system    Coactivators     BAF/PBAF complex      121224116 Chromosome and associated proteins [BR:ghi03036]  Eukaryotic type   Histone modification proteins    HDAC complexes     REST complex      121224116   Chromatin remodeling factors    BAF complex     121224116    PBAF complex     121224116    GBAF(ncBAF) complex     121224116 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  SNF2-rel_dom Helicase_C ResIII QLQ DEAD Bromodomain AAA_14 HDA2-3 Motif Other DBs NCBI-GeneID:  121224116 NCBI-ProteinID:  XP_040962629 LinkDB All DBs Position D12:complement(40401508..40412219) Genome browser AA seq 2250 aa AA seqDB search MHSGSGGGGGPSRNPSVGPVGRAASTSSAASPSSSSSAVSTPHLGFDSVQQQPQQQQQQQ SQKQQHQIASRQSLQQQLLRKPEGNEANQAYQASGLQGLMGGSNFPSSPGSMQPPQMSRR FFDLPQQHASAQDSQNRSQGVEQQMASSAQQAYYQFAYQASQQQKALLAQQPAKMAMLGS ASFKDQDMRTGNIKMQELISMQAANQAQASSSKNASEQLGCAEKQMEQGSRSASEHKPPA QATVIGQLMPGNVLRAMQTQQAPQTVQNMGNNQVAMAAQLQAWALERNIDLLQPANANLM AQLIPLMQSRMAAQQKTNERNMGTQSSPVPVSKPQITSPSVPSESSPRGNSSNDISGMSG FAKTRPMAPPNTFGSTSSVGVINSANNVSMQQLAIHGLDNQVLPRQSVGHGNGMPPMHPP QVSANVSQSIDPSLPAKNSSGGIETVQMQHTKHFNRSSLQPAAPGNDGGSVNNVPSQGGA STQMPQQRFGFTKQQLHVLKAQILAFRRLKKGEGTLPQELLRAIVPPPLVVQQMQLPPLG GNNQDRDGGKNIEDQAKQVESKEKVAQAEQSTKGQNITKDEAYVGDDRANESTAHMQGAS AMAKDPSTLPAGKEEQQSSVFSVKSDHEVERGLPKAPVRSDFSADRGKAVSPQVAASDGG QVKKPMQANSAPQLKDPASARKYHGPLFDFPFFTRKHESYGSAMPNSNNNLTLAYDVKDL LFEEGMEVLSKKRSENLRKIGNLLAVNMETKRIRPDLVLRLQIEEKKLRLKDLQARLRDE VDQQQQEIMAMPDRPYRKFVRLCERQRIELARHVQVTQKALREKQLKSIFQWRKKLLEAH WAIRDARTARNRGVAKYHERMLREFSKRKDDDRNKRMEALKNNDVERYREMLIEQQTNIP GDAAERYEVLSSFLTQTEEYLQKLGSKITAAKNQQEVADAANAAAVAARLQGLSEEEVRV AAACAGEEVMIRNRFMEMNAPREGSSVSKYYNLAHAVNEKIIRQPSMLRAGTLRDYQLVG LQWMLSLYNNKLNGILADEMGLGKTVQVMALIAYLMEFKGNYGPHLIIVPNAVLVNWKSE LHNWLPSVSCIYYVGGKEQRSKLFSQEVLAMKFNVLVTTYEFIMYDRSKLSKIDWKYIII DEAQRMKDRESVLARDLDRYRCQRRLLLTGTPLQNDLKELWSLLNLLLPEVFDNRKAFHD WFSQPFQREPTHNAEDDWLETEKKVIIIHRLHQILEPFMLRRRVEDVEGSLPPKVSIVLK CRMSAIQSAIYDWIKSTGTLRVDPEDEKRKVQKNPIYQAKVYKTLNNRCMELRKTCNHPL LNYPYFNDFSKDFLVRSCGKLWILDRILIKLQRTGHRVLLFSTMTKLLDILEEYLQWRRL VYRRIDGTTSLEDRESAIVDFNSPHSECFIFLLSIRAAGRGLNLQSADTVVIYDPDPNPK NEEQAVARAHRIGQTREVKVIYMEAVVDKISSQQKEDELRSGGTVDFEDDFAGKDRYMGS IESLIRNNIQQYKIDMADEVINAGRFDQRTTHEERRMTLETLLHDEERYQETVHDVPSLH QVNRMIARSEEEVELFDQMDEELDWTEEMTCHEQVPKWLRASVREVNAAVATLSKKPSKN ILFTAGGGTESKETDTERKRGRPKKKIPSYKEIDETGEFSEASSDERNGYSGNEEEGEIG EFEDDEFSGAVGAPPVNNDQSEEDGALGDDGYEDAQASEHIRNNHILEEGGSSGSSLDSR RPTQMVSPISPQKFGSLSALDARPGSAARRLSDDLEEGEIAGSGDSHMDHQQSESWNHDR DEGEDEQVVQPKIKRKRSIRVRPRQTVERVEEKSASEEPLVQRGGSSLLSFQLDQKYQSQ LRTDTERKPTRERNAFKHDPNDSSSKSRRNLPPRQIANTSKLHASVKPGRMNSMSAPSED AGKPSRESWDSKLVNTCGSSNFGAKMSDVIQRKCKNVISKLQRRIDKEGQHIVPLLTDLW KRIEDSGYTGGSGSNQLDFRKIDQRVDRLEYSGVMELVSDVQLVLKSAMHFYGFSHEVKS EAKKVQDLFFDLLKIVFTDTDFQEARNSLSFFSPASTSTSGPSSRQVAVGKRQKQMTEVE SDSGLTQKSLQQRGPTHTGEETRIRVQLPQKESRLGSGSTREPYQQGDSLPTHPGELVTC KKKRKDREKSMVKPRTGSVGPISSPSIVRNIRSPTAGSVSKDVRPTQQTTHQPWPNQPAH LSNGSSGSVGWANPVKKLRTDTGKRRPSHL NT seq 6753 nt NT seq  +upstreamnt  +downstreamnt atgcattctggtagtggtggcggaggtgggcccagccggaacccgagtgtgggcccggtg ggtcgggcggcatctacatcgtccgcagcttcgccatcttcttcgtcgtcggccgtttcg accccacacttggggtttgattcggtacaacagcagccgcagcagcagcaacaacaacaa agtcagaaacagcagcatcaaattgcgtctaggcagtcattacaacaacaattacttaga aaacctgaaggaaatgaagctaaccaagcatatcaagccagtggtctgcaaggtctgatg ggaggtagcaattttccttcatctccaggctccatgcaaccgccgcaaatgtccaggagg ttctttgatctgcctcaacaacatgcttctgcgcaggacagccagaataggagtcaaggt gttgagcaacaaatggcgagttctgctcagcaagcttattatcagtttgcttaccaggct tctcagcaacagaaggcacttttggcacagcagccagctaagatggccatgttgggctct gcatcttttaaggatcaggacatgcgaactggaaacataaaaatgcaggaacttatctcc atgcaggctgctaatcaggctcaggcatcatcctctaagaacgcatctgagcagcttggt tgtgctgaaaagcagatggagcaaggatcaaggtctgcttctgagcacaagccacccgct caggcaacagttattggacaattaatgcctgggaatgttttaagggccatgcagacacag caagctcctcagactgttcaaaacatgggaaacaatcaagttgctatggctgcacagttg caggcatgggcacttgagcgtaatattgatctgttgcaacctgcaaacgccaacttgatg gcacagctcattccactaatgcagagtaggatggctgcccagcaaaaaacaaatgaaagg aatatgggtactcagtcatcaccagtacctgtgtccaagccgcaaatcacttctccatca gttccaagtgagagttctccccgtggtaactcatcaaacgatatatctggcatgtctggc tttgccaaaactaggccgatggctccaccaaacacttttgggtcaacttccagtgttggg gtgattaacagtgctaacaatgtttcaatgcagcagttagcaattcatggcctagataat caagtgcttcccaggcagtcagttgggcatggaaatgggatgcctcctatgcatcctcca caagtatctgcaaatgttagccagagtattgatccatccttgccagcaaaaaattcatca ggtggcatagaaacggtgcaaatgcagcatacgaaacacttcaatcgatcttctcttcag cctgctgcccctggtaatgatgggggatctgttaacaatgtaccatcacaagggggagct tctacccagatgccacagcagcgttttggtttcactaaacaacaacttcatgttctcaaa gcacaaatactagcatttaggcgcctgaagaaaggagaaggtacacttccacaagagctt cttcgagccattgttcccccaccacttgtggtgcagcagatgcaattacctcctttaggt ggaaataaccaggacagagatggtggaaagaatatagaagatcaagcgaagcaggtggag tcaaaggagaaggttgcacaggctgagcaatctaccaaaggacagaatattactaaagac gaagcttatgtaggagatgatagagcaaatgaatcaacagctcatatgcaaggtgcgtca gctatggctaaggatccatctacattacctgctggaaaagaagagcagcaaagttctgtc ttttctgtcaagtcagaccacgaagtagaacgtggtcttccgaaagctccagttcgaagt gattttagtgcagacaggggaaaggctgtttcaccacaagttgcggcatctgatggaggg caagttaagaaacccatgcaggcaaactctgccccccagctaaaggatcctgcctctgcc agaaagtatcatggtccactctttgatttccccttcttcactaggaaacatgaatcatat ggctcagcaatgcctaacagcaataataatttaactttggcgtatgatgtcaaagaccta ctctttgaggaaggcatggaagtccttagcaagaaacgatcagagaatttgaggaagatt ggtaacttactagcagtaaatatggagacaaaaaggattaggccagatcttgttctgcga ctgcaaattgaagaaaaaaagcttcgacttaaagatctgcaggctcgtttaagggatgaa gttgaccagcagcaacaagagataatggcgatgcctgacagaccgtacagaaaatttgtc cgcctgtgtgagcgtcagcgtattgagctggcgagacacgtacaagtcactcagaaggcc ctaagagagaagcagttgaaatccatctttcagtggcgtaagaagctcctggaggctcat tgggctatccgtgatgcacgaactgctcgtaataggggagttgccaagtaccatgaaaga atgttacgagagttttcaaagaggaaagatgatgatagaaataaaaggatggaagccttg aagaataatgatgttgaaaggtaccgggagatgttgattgagcagcagacaaatatccct ggagatgctgcagagagatatgaagttctttcatcattcttgacgcagactgaagaatat cttcaaaaactgggaagtaagattacagctgccaagaatcagcaggaagtagctgatgca gcaaatgctgctgctgttgctgcacggttgcagggcctatcagaagaagaagttagggtt gcagcagcttgtgctggggaggaagtaatgataagaaatcggtttatggaaatgaatgca cccagggaaggttcatctgttagcaagtattataatcttgctcatgctgtcaatgaaaag atcataaggcagccatcaatgctacgagctggaacattgcgagactatcagcttgttggt ttgcagtggatgctttctttgtataataataaactaaatggtattttggctgatgagatg ggtcttgggaaaactgttcaggttatggcattgattgcttatttgatggaatttaaagga aactatggcccgcatcttataattgtcccaaatgctgttctagtaaattggaagagtgag ctccacaattggctgccatctgtgtcatgtatctattatgtcggaggaaaagaacaacgt tcaaaattattttctcaagaggttctggcaatgaaatttaatgtccttgtgacaacttat gaattcatcatgtatgaccggtcaaaactttctaagattgattggaagtacatcataatt gatgaagcacagcgaatgaaagacagggaatctgttttagctcgtgatcttgataggtac cgctgccaaaggcgtttacttcttactgggacaccattacagaatgacttgaaagaactc tggtcattgttaaatcttctccttcctgaagtgtttgataatcgcaaggcgtttcacgat tggttttcgcaaccatttcaaagggaacctacacataatgcagaagatgattggcttgag acagagaagaaggttatcatcatccatcgacttcatcaaattctagagccctttatgctt agacgtcgtgttgaagatgtggaaggttcacttcctccaaaggtctcaatagttttaaaa tgcagaatgtcagctattcagagtgccatttatgattggataaaatcaactgggactctt cgagttgatccagaagatgagaagcgcaaggttcaaaaaaatccaatataccaggctaag gtgtacaaaactttaaataaccggtgtatggagcttcggaagacttgtaatcatcctttg cttaattacccatatttcaatgacttctccaaagatttccttgtaagatcttgtgggaaa ttgtggatcctagacagaatcctaataaaactgcagagaaccgggcatcgagtattactc tttagtaccatgacgaaacttctggatatcttggaggaatacttgcagtggaggaggctt gtctacagacgtattgatggaacaactagtttggaagatcgagaatcagctattgttgac ttcaatagcccgcactctgagtgcttcatattcttactaagtattcgtgctgctggacgt ggtctaaatcttcaatctgctgacactgtagtgatctatgatcctgatccaaatcctaaa aatgaggaacaggcagttgctagagctcaccgaattggacaaacaagggaagtcaaagta atttacatggaagcagttgttgacaaaatctctagtcagcagaaggaggatgaattaagg agtggaggtacagttgattttgaggatgattttgctggtaaggatagatatatgggatcc attgagagcctcataaggaataacattcaacagtataaaatcgacatggccgatgaagta atcaatgctggacgttttgaccagagaacaacacatgaagagagacgcatgactttggaa acattgttgcatgatgaggagaggtatcaagaaactgtccatgatgttccctcattgcat caggtaaatcgcatgatagcaagaagtgaggaagaagttgagctgtttgatcaaatggat gaagaactggattggactgaggagatgacttgtcatgaacaggtacctaagtggcttcga gccagtgtaagagaagtaaatgctgctgtagctactttatcaaaaaagccatcaaagaac attttatttactgctggtggcggtactgaatccaaagaaacagatactgagagaaaaagg gggcggcctaagaaaaaaattcccagctataaggaaatagatgaaactggggaattttct gaggcaagttctgatgagagaaatggctattctgggaatgaagaagagggagaaattggt gaatttgaagatgatgaatttagtggtgctgttggggctccacctgtaaataatgatcag tcagaagaagatggtgcacttggtgatgatgggtatgaggatgcccaggcttcagaacac attagaaacaaccacatacttgaagaaggtggttcttcaggatcatcattggatagtcgt agaccaacacagatggtgtctccaatatctcctcagaaatttggatctctctctgcatta gatgctaggcctggttcagctgcaagaagactgtccgatgatttggaggaaggtgaaatt gcaggatcgggagattctcacatggaccaccagcaatccgaaagttggaatcatgatcgc gatgaaggcgaagacgaacaagttgtccaacccaagataaaacgaaagcgcagtattcgg gttcgacctcgtcaaactgtggaaagagtagaggagaaatcggccagtgaagagcctctt gtccagcgtggaggttcatctctgttgtctttccagctggaccaaaaataccaatcacaa ctgaggactgatactgaaagaaaaccaacacgtgagcgcaatgctttcaagcatgatccg aatgattcgtcttccaaaagtaggaggaacttaccgccaagacaaatagctaatacatca aagttgcatgcatcagtgaagcctggtcgaatgaattctatgtctgctccttcagaagat gctggcaaaccctccagagagagctgggacagtaaactggttaatacatgcgggtcttca aattttggtgctaagatgtctgacgtcatccaaagaaagtgcaaaaatgtgattagcaag cttcagaggagaatagataaggagggtcaacatatagtaccacttttgacggacttgtgg aagagaattgaagactctggttacacaggtggaagtggaagcaatcagttggatttccgg aagattgatcagcgtgttgacagattagagtacagtggagttatggagcttgtttcagat gtgcagctagttttaaaaagtgccatgcatttttacggtttttcacatgaggtcaaatct gaagcaaagaaagtacaagatctgtttttcgacttgttgaagatagtatttacagataca gatttccaggaagctagaaattcattatctttcttcagtccagcatctacgtccacctcg ggtccctcctctagacaggtagctgttggcaagagacagaagcagatgacggaggtagaa tctgattcaggcttgactcaaaagtcgttacaacaacgtggacccacccatactggtgag gaaacaaggattagagtgcagttgccccaaaaggaatcgaggcttgggagtggaagtacc agggaaccatatcaacaaggtgattctcttccaactcatccgggtgagctggttacttgc aagaagaagaggaaagacagggaaaagtctatggtaaagcctaggactggatctgttggc cccatttcatccccgagtatagttcggaacatcaggagtccaacagcaggatcagtctct aaggatgtgagaccgacccaacagaccacccatcagccttggcccaaccaacctgctcat ctgtcaaatggtagtagtgggagtgttggttgggccaatcctgtgaagaagttgagaaca gacacaggtaaaaggaggccaagccatttatga

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