Gossypium hirsutum (upland cotton): 121224241
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Entry
121224241 CDS
T04793
Name
(RefSeq) SNAP25 homologous protein SNAP33-like
KO
K18211
synaptosomal-associated protein 25
Organism
ghi
Gossypium hirsutum (upland cotton)
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ghi04131
]
121224241
Membrane trafficking [BR:
ghi04131
]
SNARE
SNAP-25 (Qb,c)
SNAP-25
121224241
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
V-SNARE_C
Rh5
ATG16
Motif
Other DBs
NCBI-GeneID:
121224241
NCBI-ProteinID:
XP_040963060
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All DBs
Position
D12:complement(53267175..53270577)
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AA seq
304 aa
AA seq
DB search
MLGLKKSPLKTAKHNSVDPARVAASRSNPFDSDDEFDNKQTLKPSRRTSSEPTLSPPNFG
ANPLDDNEGKVNSSSSYWQSSASRNKYKNDFRDSGGLENQSVQELENYALYKSEETTKTV
NNCVKIAEEMREGATNTLIALHQQGEQITRTHNTAAGIDHDLSRGEKLLGSLGGMFSRTW
KPKKTRQIVGPVITRDDLPKSRGGHLEQKEKLGLNTVPRRHSKSQTPPPEPADAYQKVEF
EKAKQDDGLSDLSDLLGELKVMAVDMGSEIERQNKSLNGLQDDVDELNFRVRGANQRARR
LLGK
NT seq
915 nt
NT seq
+upstream
nt +downstream
nt
atgttaggtttaaagaaatctccattgaagactgctaagcataattcagttgatcctgcg
cgtgtggccgcttctcgttccaacccctttgattctgatgacgagtttgacaataagcaa
acccttaaaccttcaagaaggacttcttctgaacctactttgagtccaccgaattttggg
gccaatcctcttgatgacaatgaggggaaagtgaactcttcttcttcatattggcaaagt
tcagcatcacgaaacaagtataagaatgatttccgtgattctggcggacttgagaaccaa
tcggtgcaagaattggagaactatgccctctacaagtctgaggagactactaagaccgtc
aacaattgtgtgaagattgcagaagaaatgagagaaggtgctaccaatactttgattgcc
ttacatcaacagggtgaacagattacccggactcataatacggctgctggcattgatcat
gaccttagtcggggcgagaagctcttgggaagtcttggaggcatgttctctagaacctgg
aaaccgaagaagactcgacaaatagttggccctgttattacaagagatgatttgcctaag
agtagaggtggccacttggagcaaaaggagaaactgggattgaatacggttccaaggaga
cattcaaaatcacaaacgccgccccccgagccggcggatgcgtatcaaaaagtcgagttt
gaaaaggcaaagcaagatgacggcctctccgatttaagcgatttactgggagagttgaag
gttatggctgtcgatatgggatccgaaatcgagaggcaaaataagagtctgaatggtctc
caagatgatgtggatgagctaaatttccgtgtgagaggtgcaaatcaacgagctcgccga
ttgcttgggaagtaa
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