KEGG   Gossypium hirsutum (upland cotton): 121224270
Entry
121224270         CDS       T04793                                 
Name
(RefSeq) snurportin-1-like
  KO
K13151  snurportin-1
Organism
ghi  Gossypium hirsutum (upland cotton)
Pathway
ghi03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:ghi00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    121224270
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:ghi03041]
    121224270
Spliceosome [BR:ghi03041]
 Other splicing related proteins
  Proteins involved in snRNP biogenesis
   Other proteins involved in snRNP biogenesis
    121224270
SSDB
Motif
Pfam: SPN1_m3Gcap_bd mRNA_cap_enzyme Aft1_HRR Snurportin1
Other DBs
NCBI-GeneID: 121224270
NCBI-ProteinID: XP_040963139
LinkDB
Position
D12:54296083..54300406
AA seq 422 aa
MAPHDIRRPFKRAAISDQQKRRELSLLRQAQNRRDAQQQARCLASSILSLQSAAPESQPE
QSDIELETVPEAEQESEAFSKDLDVRQASKLRGPEVRKWFARQLMLPEWMIDVPDRLAQD
WYVFARPAGKRCFVVSSNGTTVSRQRNGSILHHFPSALPAGAKIRDGSGSAQSYCILDCI
FHELDQTYYVIDMVCWNGYSLYDCTAEFRFYWLNSKLEESGACNAPSHYHKFRFSAVPVY
NCDQSGLHAAYTGVVPYAKDGLLFYNKHALYQTGNTPLALVWKDDNCSQFVIDTDGKGEI
PSQQQVVLELQDDRKLVTSDDPPVLFGCLDGDIIEKSGLHTGNLLRFAIGDGGLSFVDGK
LEKADLIYLGKSNRARAFADSYSKVLFQFMVRHSPLKIDDLLASINSANDQEKTPSDIEM
VG
NT seq 1269 nt   +upstreamnt  +downstreamnt
atggcgccgcacgacattcgccgtccgttcaagcgagcggcgatatccgatcagcagaag
cggagggagctctcgctgctccgtcaagcgcagaatcgtcgcgatgctcaacagcaagct
cgctgcttggcttcgtctattctctcgctccagtctgctgcacccgaatcccaacctgaa
caatccgacatcgaattagaaaccgtacccgaagccgaacaagaatctgaagctttttcg
aaagacctcgatgtccgtcaagcttcgaagctccgaggaccagaggttcgaaaatggttc
gcgaggcagcttatgcttcctgagtggatgatcgacgtccctgatcgcttggcccaagac
tggtatgtatttgcaaggccagctggaaagcgatgctttgtggtttcatcaaacggaacg
acagtgagcaggcaaagaaacggctccattttgcatcatttcccatcggctttaccagct
ggagccaagatcagagatggctcgggctcagctcaatcatattgtatcctggattgcatt
ttccacgagttggatcagacttactatgtgattgatatggtttgctggaatggatactct
ctctatgattgtactgctgagtttagattctattggttgaactcgaagctcgaagagagc
ggtgcttgcaatgcgccttcacattatcataaatttaggttcagtgctgttccggtgtat
aattgtgatcagagtggcctacatgcagcatacactggagttgtgccgtatgctaaggat
ggattactgttttataacaagcatgcactctatcagactggcaacacacccctcgcatta
gtctggaaggatgataactgtagccaatttgttattgacaccgatggtaaaggagagatc
ccaagccaacaacaggtagttttggagctgcaagatgatagaaaactggtaacatcagat
gaccctcctgtgctgtttggctgcttagacggggatatcatagaaaagtcagggctgcat
acagggaaccttttacggtttgctattggtgatggaggattgagttttgttgatgggaag
cttgagaaggctgatttgatttatcttggcaagtccaaccgggcacgagcttttgcagat
agttactcaaaggttttgttccagttcatggttcgacattctcctctaaagatagatgat
cttctagcatcaattaactccgcaaatgatcaagaaaagacaccaagtgacatcgagatg
gttggttga

DBGET integrated database retrieval system