Gossypium hirsutum (upland cotton): 121224458
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Entry
121224458 CDS
T04793
Name
(RefSeq) protein argonaute 1-like isoform X1
KO
K11593
eukaryotic translation initiation factor 2C
Organism
ghi
Gossypium hirsutum (upland cotton)
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ghi03019
]
121224458
03036 Chromosome and associated proteins [BR:
ghi03036
]
121224458
Messenger RNA biogenesis [BR:
ghi03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
121224458
Chromosome and associated proteins [BR:
ghi03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
121224458
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
121224458
microRNA pathway
RISC loading complex
121224458
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Piwi
ArgoN
PAZ
ArgoL1
Gly-rich_Ago1
ArgoL2
ArgoMid
Motif
Other DBs
NCBI-GeneID:
121224458
NCBI-ProteinID:
XP_040963751
UniProt:
A0ABM3B9M6
LinkDB
All DBs
Position
D12:62924535..62931677
Genome browser
AA seq
1059 aa
AA seq
DB search
MGRKKRSDNPSGGESSQSHDTGAGSGQGPQRPPQQQGGSGGYSGGRGWAPQSQQGGRGGY
GTGGRGRGMPQQQYGGGPPEYQGRGRGGSSQQGGRGGYGGGRGSGDHGGGPFAGGPSRPP
VPELHQATQPMQVEVIRQPAPSEAGSSSRPPPEPVPLTEHFQQLSIQQEAGQAIQPVPPS
SKSVRFPLRPGKGSTGIRCIVKANHFFAELPDKDLHQYDVTITPEVASRGVNRAVMEQLV
KLYRESHLGKRLPAYDGRKSLYTAGPLPFVSKEFKITLTDEDDGSGQPRRDRDFKVVIKL
AARADLHHLGLFLQGRQADAPQEALQVLDIVLRELPTTRYCPVGRSFYSPDLGRRQPLGE
GLESWRGFYQSIRPTQMGLSLNIDMSSTAFIEPLPVIDFVTQLLNRDVSRPLSDADRVKI
KKALRGVKVEVTHRGNMRRKYRISGLTSQATRELTFPVDDRGTMKSVVEYFHETYGFIIQ
HTQWPCLQVGNQQRPNYLPMEVCKIVEGQRYSKRLNEKQITALLKVTCQRPQEREYDIMK
TVQHNAYHEDPYAKEFGIKISEKLASVEARILPPPWLKYHDTGKEKDCLPQVGQWNMMNK
KMVNGGTVNNWICINFSRQVQDSLARRFCYELAQMCYISGMAFTPEPVLPPISARPEYVE
RVLKTRYHDAMIKLQPQNKELDLLIVILPDNNGSLYGDLKRICETDLGIVSQCCLTKHVF
RMSKQYLANVALKINVKVGGRNTVLVDAISRRIPLVSDRPTIIFGADVTHPHPGEDSSPS
IAAVVASQDWPEVTKYAGLVCAQAHRQELIQDLFKTWQDPARGTVSGGMIKELLISFRRA
TGQKPQRIIFYRDGVSEGQFYQVLLYELDAIRKACASLEPNYQPPVTFVVVQKRHHTRLF
ANNHNDRRSVDRSGNILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENKF
TADALQSLTNNLCYTYARCTRSVSIVPPAYYAHLAAFRARFYMEPETSDSGSMTSGTAAG
RGGGAAAAGGRSTRGPGASAAVRPLPALKENVKRVMFYC
NT seq
3180 nt
NT seq
+upstream
nt +downstream
nt
atgggtaggaagaagagaagtgataatccttctgggggcgagagctctcagtctcatgat
actggtgctggtagtggtcagggtccccaacgtcctcctcaacaacaagggggaagtgga
ggttactcgggtggacgaggttgggctccacaatcccagcaaggaggtcggggtggttat
ggcactggtggtcggggtcgtggaatgccacaacagcagtatggtggaggacctcctgaa
taccaaggtagaggaaggggaggttcttctcagcaaggaggtcgtgggggatatggtggc
ggtcgaggtagtggtgaccatggtggaggaccttttgctggtggaccatcccgaccacct
gttcccgagctgcaccaagcaacccaacctatgcaagttgaggtgatccgccagcctgct
ccgtctgaggcaggctcatcatccaggccaccaccagagcctgtaccattgaccgagcat
tttcaacagctttccatccagcaagaagctggccaagcaattcagccagtccctccatca
agcaagtcagtgaggtttcctcttcgacctggaaagggtagcactggcataaggtgcatt
gtcaaagctaatcatttctttgctgaattgccagataaagatttgcaccagtatgatgtt
actattacaccggaggtagcatctcgaggagtgaaccgggctgtcatggagcagctagtg
aaattatatagagaatcacatctaggaaagcgccttcctgcttatgatggccggaagagt
ctttacactgctgggcctctcccttttgtgtccaaggagtttaagatcacccttaccgac
gaggatgatggttcaggacagccaagaagagaccgggactttaaagttgtaatcaaattg
gctgctcgtgctgatctgcaccatcttggactctttttgcaagggagacaagctgatgca
cctcaggaagctcttcaggttcttgacattgttcttcgtgaattacctactaccaggtat
tgtcctgttggccgttcattctactcacctgacctagggagaaggcagcctttgggtgag
ggattagaaagctggcgtggcttttatcaaagcattcgtcctacacagatgggactatcg
ctgaatattgatatgtcttctactgctttcattgagcctttgcctgttattgattttgta
acacaattgctaaaccgtgatgtttctagaccactatctgatgctgatcgtgtgaagatt
aaaaaggctcttagaggagtcaaagtagaagttacacatcgtggcaacatgcgaagaaaa
tatcgaatatcgggtttaacatcacaagcaactagagagttgacttttcctgtagatgat
agaggtacaatgaaatctgttgtggagtatttccacgaaacttatggtttcatcattcaa
catacccaatggccttgtctacaagttggaaaccagcagagaccaaattatttgccaatg
gaggtatgcaagattgtcgagggtcagaggtactcaaagagattgaatgagaaacaaatt
actgctttactgaaggtcacctgccagcgtcctcaggaaagagagtatgatattatgaag
acggtacaacataatgcttatcatgaagacccgtatgctaaggaatttggaattaaaatt
agtgagaagcttgcttcagttgaagcgcgtattctgcctccaccgtggcttaaatatcat
gatactggtaaagagaaggattgcctgcctcaggttgggcaatggaatatgatgaacaag
aaaatggttaatggtgggactgtaaacaactggatctgcataaacttttctcggcaagtc
caggatagtttggcacggaggttttgttatgagcttgcacaaatgtgttacatctctggc
atggcctttactcctgaaccagtgcttcctccaattagtgctcgtcctgagtatgttgag
agggttttgaaaacacggtatcatgatgccatgattaaactgcagccgcagaacaaagaa
cttgacctgcttattgttattcttccagataataatggctctctttatggtgatttgaaa
aggatttgtgagactgatcttggtattgtttcccagtgctgcttgactaaacatgtattt
agaatgagcaaacaatatttggccaatgtggcattgaaaattaatgtcaaggttggggga
agaaatactgttcttgttgatgcaatatcacgaaggatacctcttgtcagtgaccgtccg
actataatttttggtgctgatgttacccatcctcaccctggggaggattcaagcccttct
attgcagctgttgttgcctctcaagattggccagaggttacaaagtatgctggcctggtt
tgtgctcaagctcatcgacaggagctcatccaagatttattcaagacatggcaggatcct
gcaagggggactgtttctggtggcatgattaaggagctcttaatatctttccgacgagcc
actggacagaagccacagcgcattatattctacagagatggtgtcagcgaaggccagttc
tatcaagttctattatatgaacttgatgctattcgtaaggcatgtgcctcattggagcca
aattatcagcctcctgttacatttgttgtggtgcaaaaaaggcatcatacaaggttgttt
gctaacaatcataatgatcgccgttctgtagacaggagtgggaatattttgcctggcact
gtggtggactccaaaatttgtcacccaacggagtttgacttctacttatgcagccatgct
gggattcagggtacaagccgtccagctcattaccatgtgctatgggatgagaacaagttt
acagctgatgcattacagtcccttacaaataacctttgctatacatatgcaaggtgcaca
cgatcagtgtcgattgttccccctgcgtactacgcacatcttgctgcattccgagctcgc
ttttatatggaaccagaaacatcagacagtggatcaatgacaagtggcacagctgcaggg
cgtggaggtggagctgcagctgctggtgggcgtagcacaagaggacctggtgctagtgct
gccgtcagacctctgcctgccctcaaggaaaatgtcaagcgtgttatgttctactgttaa
DBGET
integrated database retrieval system
