Gossypium hirsutum (upland cotton): 121224594
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Entry
121224594 CDS
T04793
Name
(RefSeq) serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B beta isoform-like
KO
K04354
serine/threonine-protein phosphatase 2A regulatory subunit B
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi03015
mRNA surveillance pathway
ghi04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
121224594
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
121224594
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ghi01009
]
121224594
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ghi03019
]
121224594
03036 Chromosome and associated proteins [BR:
ghi03036
]
121224594
Protein phosphatases and associated proteins [BR:
ghi01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
121224594
Messenger RNA biogenesis [BR:
ghi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
121224594
Chromosome and associated proteins [BR:
ghi03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
121224594
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
Beta-prop_THOC3
Beta-prop_IFT122_1st
WD40_Prp19
Beta-prop_WDR5
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
WDR55
Beta-prop_NOL10_N
Beta-prop_RIG_2nd
WD40_MABP1-WDR62_2nd
Motif
Other DBs
NCBI-GeneID:
121224594
NCBI-ProteinID:
XP_040963997
UniProt:
A0ABM3BAA3
LinkDB
All DBs
Position
D12:complement(62931840..62938928)
Genome browser
AA seq
528 aa
AA seq
DB search
MDKIHRPVRKKEIDSQKYDYEHPRSASSPTGLREEWKFSQVFGERSSDDEIQDADRISTV
EFDKSGDYVAVGDRGGRIVIFETKDGKNTADQHYSRNQLEQLDYVSLNHPEYRYKTEFQS
HEPEFDYLKSLEIEEKINKLKWCTSLSGSLFILSTNDKTIKLWKVKDRKVKKAREIDSPH
QLLSSENTLLSERSFMNEQGIPSFANGNHVESGADSIFPSQEPRSKIANYEDTAYARCRR
VYAHAHDFNINSLSNNSDGEPFISADDLRINLWNLEVSNQSFNIIDMKPSNMEELTEVIT
SSEFHPIHCNLLAYSSSRGFIRLVDMRQSALCDYSARIFQDEECHGSRSFLTEIVASITD
IKFPVDGRHILSRDYMNLKLWDMHMDSSPVATFKIHEHLRPKLCDLYNNDSIFDKFECCL
SGDGLHFATGSYSNLLRIFFHGGGSDEGDTIEASKDPNSIKNRKPLPRARRSSLSNLTRG
FYKQGHESTSVDCEYSLNSSSKLQHLAWHPCTYLIACASGNSLCFYHA
NT seq
1587 nt
NT seq
+upstream
nt +downstream
nt
atggacaaaatacacaggccagtgaggaagaaggaaatagatagccaaaaatatgattac
gagcacccgagatcggcttcttcaccgaccggactgagggaagagtggaagttctctcaa
gtcttcggcgaaagaagctccgatgacgaaattcaagacgccgatagaatatcgacggtt
gaatttgacaagagtggcgattacgttgctgttggagatcgaggcggtcggatcgtgata
ttcgagacgaaggatggaaaaaatacagcagaccagcactattcccgaaatcaactggag
cagttggattatgtctctttaaaccaccctgaatatcgatataaaactgaattccagagt
catgaacctgagtttgattatttgaagagcctggagattgaagagaagatcaacaaactc
aaatggtgtacaagtctaagtgggtcactctttatcctttccacgaatgataagacaatt
aaactgtggaaggtaaaggatagaaaggtgaagaaagccagggaaatagattctcctcat
caattgctctcttcagaaaatactcttctgtctgaaaggagttttatgaatgagcaaggc
ataccgtcttttgctaatggcaatcacgtagaaagtggagctgacagtattttcccatct
caagaaccgcgttctaagattgccaactatgaagacactgcttatgcaagatgtagaagg
gtgtatgctcatgctcatgattttaatatcaactcactttcaaataatagtgatggtgag
ccgtttatatctgcagatgatcttaggataaacttgtggaaccttgaagttagtaatcag
tcatttaatatcattgacatgaagccatcaaatatggaggagcttactgaggtcataaca
tcatctgaattccatccaattcactgtaacttgcttgcatatagcagctcaagaggtttt
attcgtctagttgacatgcgacaatctgcattgtgtgattacagtgcaaggatatttcag
gatgaagaatgtcacgggtcacgatcattccttaccgagattgttgcttccataactgat
ataaagtttccagttgatggacgtcacatcttaagccgtgactacatgaaccttaagcta
tgggatatgcacatggattcttcaccagttgctacattcaaaattcacgaacacttacgc
ccgaagttgtgcgatttgtataacaatgactccatatttgataaatttgagtgctgcctc
agtggagatggacttcattttgcaacaggatcttatagtaatctcttacgtatcttcttt
catggtggtgggagtgacgagggggatacaatagaagctagcaaagacccgaacagtatt
aaaaataggaagccacttccaagggcaagaagatcatctctaagtaaccttacacgcggg
ttttacaaacaaggtcatgaaagcaccagcgttgattgtgaatattcgttgaactcgagt
tcaaagttgcaacatctcgcatggcatccatgtacatacttgatcgcttgtgcttctggt
aatagcttgtgcttctaccatgcctag
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