Gossypium hirsutum (upland cotton): 121224632
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Entry
121224632 CDS
T04793
Name
(RefSeq) neutral ceramidase 1-like
KO
K12349
neutral ceramidase [EC:
3.5.1.23
]
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi00600
Sphingolipid metabolism
ghi01100
Metabolic pathways
Module
ghi_M00099
Sphingosine biosynthesis
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09100 Metabolism
09103 Lipid metabolism
00600 Sphingolipid metabolism
121224632
Enzymes [BR:
ghi01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.23 ceramidase
121224632
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Gene cluster
GFIT
Motif
Pfam:
Ceramidase_alk
Ceramidse_alk_C
Motif
Other DBs
NCBI-GeneID:
121224632
NCBI-ProteinID:
XP_040964180
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All DBs
Position
A03:10282363..10287896
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AA seq
778 aa
AA seq
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MMELLASIGCHFRIPLKTMWLWISLVLVLQYSKTVLSDSNYLIGLGSYDITGPAADVNMM
GYANTEQIASGIHFRLRARSFIVAEPQGKRVVFVNLDACMASQLVTIKVLERLKARYGNL
YTEQNVAISGIHTHAGPGGYLQYVVYIVTSLGFVHQSFDALVDGIEKSIVQAHENLQPGS
IFVNKGELLDAGVNRSPSAYLNNPASERSKYKYNVDKEMTLLKFVDDQWGPVGSFNWFAT
HGTSMSRTNSLISGDNKGAAARFMEDWFEQNSAKSDELGTDEIPRRVSSIISSIHNNHHE
LLELASSFQSSPGKPATRISSAARRVRSALRQADKPGFVSAFCQTNCGDVSPNVLGAFCL
DTGVPCDFNHSTCGGKNELCYGRGPGYPDEFESTRIIGERQFNKAVDLFNTASEQLKGKI
DYRHSYVDFSQLEVTIPKEGGGSEVVKTCPAAMGFAFAAGTTDGPGAFDFKQGDDKGNPF
WRLVRNLLKAPDKKQVECHSPKPILLDTGEMKQPYDWAPSILPVQILRIGQLVILSVPGE
FTTMSGRRLRDAVKTMLTSSGSGEFGSNTHVVIAGLTNTYSQYITSFEEYQIQRYEGAST
LYGPHTLSAYIQEFQKLASALIKGQTVEPGPQPPDFLKKQISFLTPVVMDSTPAGVNFGD
VSSDVPANSTFKRGSTVTVVFWSACPRNDLMTEGTFALVEILQGKDTWVPTYDDDDFCLR
FNWSRPSKLSPRSQATIEWTIPPSASLGVYRIRHFGAAKRLMGSIQHFTGTSSAFVVA
NT seq
2337 nt
NT seq
+upstream
nt +downstream
nt
atgatggagttacttgcttctattggctgccattttcgaattcctttgaaaaccatgtgg
ttatggatatctttggtactagtgctgcaatatagtaaaactgtgctttcagattccaac
tatttaattgggctgggaagctatgacattactgggccagcagccgacgttaatatgatg
ggatatgctaacacagaacaaattgcttcggggattcactttaggctgcgagctcggtca
tttatcgtggcagagccacaagggaaacgagtagtttttgttaatctcgatgcttgcatg
gcttcacaattagtgactataaaggttcttgagagattgaaagcaaggtatgggaactta
tatactgaacagaatgttgctatcagtggtattcacacccacgcaggtcctggtggttat
ctccaatatgtggtgtatattgttacatctcttggatttgttcatcagtcatttgatgcc
ctggtagatggcatcgagaaaagtattgtacaagctcatgaaaatctccaacctggatca
atttttgtgaacaagggagagctattagatgccggagtaaaccgtagtccgagtgcctat
ctcaataaccctgcatcagagcggagcaaatataagtacaatgttgataaagaaatgacc
cttttaaagtttgtagatgaccaatggggtccagtgggtagcttcaactggtttgcaact
catggaacatcaatgagtcgtacaaactctctgatcagtggtgataacaagggtgcagca
gcacgatttatggaagattggtttgagcagaacagtgctaaaagtgatgaattgggtact
gatgaaatacctcgaagagtttcgagcatcatttctagtattcataataatcaccatgag
ttgctggagcttgcttcatccttccagtcttctcctggtaaacctgcaaccaggatttcg
agtgctgctagacgtgtcaggagtgctcttcgacaggctgataagccaggatttgtgtct
gcattttgccaaacaaattgtggtgatgttagtcccaatgtacttggagcattttgtctc
gacactggtgttccttgtgacttcaatcatagtacctgtggtggaaagaatgaactatgc
tatggccgaggaccaggctatcctgatgaattcgaaagtacacgtattattggagagaga
caattcaataaagctgtggatctgtttaacacagcatctgagcaattaaaaggaaagatt
gactatcgccactcatatgtagacttctcccagcttgaggttacaattcctaaagaagga
ggaggttctgaggtagttaaaacatgccctgctgcaatgggatttgcttttgcagcagga
acaactgatggccctggggcattcgattttaagcaaggagatgacaagggaaatcctttc
tggaggcttgtgcgcaacttacttaaagctcctgataaaaaacaagtagagtgtcattct
ccaaagcccatcttgttagatactggtgaaatgaagcaaccgtatgattgggcgccttca
atacttccagtacagatccttcggataggacagctagtcattcttagtgtacctggagaa
tttacgacaatgtctggaaggcggcttcgagatgctgtaaaaaccatgcttacaagcagc
ggtagtggagaatttggtagtaacactcatgttgtcattgctgggttgaccaatacatat
tcacagtatattacttccttcgaggagtaccagattcagagatatgagggtgcctccacg
ctgtatggtccgcacacactcagtgcctacattcaggagttccagaagctcgcaagtgct
cttatcaaaggccaaactgttgaacctggcccgcaacctcctgattttctaaagaaacaa
ataagctttctcactcctgttgtaatggactctacccctgctggtgtaaatttcggggat
gtcagctctgatgttccggctaactcaacttttaagagaggtagcacggtgactgtggtc
ttctggtcagcttgccccaggaacgatctcatgacagaaggtacattcgctcttgttgag
atactccaagggaaggatacatgggttccaacttatgatgatgacgatttctgccttcgg
tttaactggtcaagaccttcgaaactaagcccccgaagtcaagcaaccatcgaatggaca
atccctccatctgcctcgctaggagtttacagaataagacattttggtgctgcgaaacgg
cttatgggatcgattcagcatttcacgggtacatccagtgcttttgtggtagcatga
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