Gossypium hirsutum (upland cotton): 121225248
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Entry
121225248 CDS
T04793
Name
(RefSeq) syntaxin-32-like
KO
K08490
syntaxin 5
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
121225248
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ghi04131
]
121225248
Membrane trafficking [BR:
ghi04131
]
SNARE
Syntaxin (Qa)
Stx-cisGolgi
121225248
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNARE
Syntaxin-5_N
BOS1_GOSR2_MEM11-like_N
YjcZ
TAF2_3rd
Prominin
DegR
Motif
Other DBs
NCBI-GeneID:
121225248
NCBI-ProteinID:
XP_040965409
UniProt:
A0ABM3BEB7
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Position
D13:61631192..61636455
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AA seq
339 aa
AA seq
DB search
MKAKAVQSSFRDRTQEFLSVSERLRKSITSGPSQNGPSSSSSRAEDKRSVVAHQSEFNRR
ASKIGLAIHQTSQKLSKLAKLAKRTSVFDDPTMEIQELTAVIKQDITALNSAVVDLQLFC
NSKNEGGVSSDTSSHSTTVVDDLKNRLMSATKEFKDVLTMRTENLKVHENRRQLFSSTAS
KDSPNPFIRQRPLAAKSAAGASNNLPQWANGSASSSQLFPRKQVDAESQPLLQQQQQHQQ
QMVPLQDSYMQSRAEALQNVESTIHELGTIFNQLATLVSQQGEIAIRIDENMDDTLSNVE
GAQGALLKYLNSISSNRWLMMKIFFVLIFFLMVFLFFVA
NT seq
1020 nt
NT seq
+upstream
nt +downstream
nt
atgaaagcaaaagcggtacaatcgtcatttagggatcggacgcaagaatttctgagcgtg
tcggagaggttaaggaagtcgatcacgtctggaccgagccaaaatgggccgagtagcagt
agttcgagagcggaggataagagatctgtggttgcgcatcaatcggagtttaataggagg
gcttcgaagattggattagcgattcatcagacttcgcagaagctttcaaagttagcaaaa
ttggccaagaggacttcagtttttgatgaccctactatggaaattcaagagctcactgca
gttatcaagcaggatatcactgcccttaattctgctgtggtagacctgcaacttttctgc
aattctaaaaatgaaggtggtgtctccagtgacacatctagtcattcaaccacagttgtc
gatgacttgaagaatcgcttaatgagtgccacaaaagagtttaaagatgtcctcaccatg
cgaacagagaatttaaaggttcacgagaatagaagacagttattttcttccactgcttca
aaggattctccaaatccttttatacggcagcgtcccctggctgccaaatcagcagcagga
gcttcaaacaaccttcctcaatgggctaatgggtctgcatcttcatctcagttgtttcca
agaaagcaggtggatgcggagagtcagccattgctccagcaacaacaacagcatcaacaa
caaatggttccgttgcaagacagttacatgcagagcagagccgaagctcttcaaaatgtt
gaatccactattcatgagctaggcactatattcaaccagctagccactctggtttctcag
caaggagaaattgctatcaggattgatgagaacatggatgacacattatcaaatgtggag
ggagcacaaggagcattgctcaagtacctaaacagcatatcgtctaataggtggttgatg
atgaagatattttttgtattgatttttttccttatggtattcctattctttgtggcatag
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integrated database retrieval system
