Gossypium hirsutum (upland cotton): 121225522
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Entry
121225522 CDS
T04793
Name
(RefSeq) SET and MYND domain-containing protein 4-like isoform X1
KO
K24634
SET and MYND domain-containing protein 4 [EC:2.1.1.-]
Organism
ghi
Gossypium hirsutum (upland cotton)
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
ghi04990
]
121225522
Domain-containing proteins not elsewhere classified [BR:
ghi04990
]
Zinc finger domain-containing proteins
MYND-type zinc finger domain-containing proteins
121225522
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Gene cluster
GFIT
Motif
Pfam:
TPR_1
TPR_12
TPR_2
TPR_11
zf-MYND
TPR_NPHP3
SET
TPR_10
TPR_MalT
TPR_17
TPR_9
Motif
Other DBs
NCBI-GeneID:
121225522
NCBI-ProteinID:
XP_040965791
LinkDB
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Position
D13:complement(872712..880444)
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AA seq
774 aa
AA seq
DB search
MEKLKCVVPERLKRRVEESHIDDLPSLSSSLLQLFLSLPQIHQLISELAAEPSTQAGLCG
KNEGAALDLKQKGNQCYSSGDHSQALRCYSQLQALRLAPIDAHHTGKNLVATLYLNRASL
FHKMGLPMESLRDCSRALEISPCYPKVWYRRGKVNATLGNYEDSVHDLSVAKDMEPSIGG
KKQIERELDMLARHHEKTTAKPASQKSVEIPDVPSEIKLQCVKTPDKGRGMVSQFDIPQA
SLIHAEEPYAVVILKHCRETHCHYCLNELPADTIPCISCSLPLYCSQHCQVQAGGPIHIP
DTMVGSNFKPTLECIPEHKHECQGVHWPAILPSDVVLAGRVVVKTMEQKGQFTDVPNLSE
TLGLCESYSKMSPESKLELHIYSIVLLFCLHHSFSSELSINGDSASQIVILLSQIRVNSI
AVVRMRSNTNDSYDQQDWFQNFSFGEAEAASSVEQVRVGQALYKAASLFNHSCLPNIHAY
FMSRTLLLRTTEFVSGGCALELSYGPQVGQWDCKDRLRFLEEEYFFRCWCCGCSEVNESD
LVISGFCCVNPNCSGVVLDNLVANCEKQKPNVPETISNKSHLQVHELKDIDIKKVAQISL
DQTQSSFHVDSGYCLKCGSYCNFASRSKEVKKAWTDFRRLQDSIASKDTCSTNLPDALRS
LGLLRSILHAYNKGIAEAEDILAKAFCFIGDFEPARDHCKASIEILEKLYGPNHIAIGYE
LAKLASIQLALGDCTAVYKINRLSAIFSTYYGPHAGIIFPYLLVLERERSRIIQ
NT seq
2325 nt
NT seq
+upstream
nt +downstream
nt
atggagaagcttaaatgtgtggttccagagaggctgaagcggagggtggaggagagccat
attgatgatcttccttcactatcctcttctctgctccaattgttcctcagtttgccgcag
atccatcagttgatttcagagttggcagcagagccatcgacccaggccggtctttgtggc
aagaacgagggtgctgctttggacttgaaacaaaaaggcaaccaatgctattcctctgga
gatcattcccaggctctgcgttgctattctcagttacaggcgcttcgccttgctcccatt
gacgcccaccacactggcaagaatcttgttgctactttgtatttaaaccgagcttcattg
tttcacaaaatgggcctgccaatggagtctcttcgagattgcagcagggcactagaaatt
tctccttgctatccaaaggtgtggtataggagaggtaaggtgaatgctacactggggaac
tacgaagattcggtccatgacttaagtgttgctaaggatatggagccatcaataggggga
aagaaacagatagaaagggagctggacatgcttgcacggcatcatgagaaaacaactgct
aaaccagccagccagaaaagtgtagaaattccagatgtgccttcagaaataaaacttcag
tgtgtaaaaacaccagacaaaggaaggggcatggtttctcagtttgacattcctcaagct
tccttgattcatgctgaagaaccttatgctgtggttattttgaagcattgccgagaaact
cattgccattattgcttgaatgaactacctgcagatacgatcccctgcatttcatgttca
ttgccattgtactgttcccagcactgccaagtgcaagcaggtgggccaattcatattcca
gatacaatggtaggcagtaatttcaagccaacacttgagtgcattccagaacataaacac
gaatgtcaaggtgtgcactggcctgcaatattgccttctgatgtagttctggctggtcga
gtagtagtgaaaaccatggagcagaaaggacaattcactgatgttcctaatctttcagaa
accttggggctttgtgaaagttattcaaaaatgtcgccagaaagcaaattggaactacat
atatattccattgtattgttattttgtctccatcattctttcagttctgaactgtcaatt
aatggagactctgcatcacagattgtcatacttctatctcaaattagagtgaattctatt
gcagttgtccgtatgagatccaataccaatgattcttatgatcagcaagattggtttcaa
aacttctcctttggtgaggcagaagcagctagtagtgtggaacaggtcagagtaggtcag
gctctttacaaagcagccagtttgttcaaccattcctgcctgccaaacattcatgcatat
tttatgtcgcgtactctcttactacgaacaacagagtttgtgtctggagggtgtgccctg
gaattgtcttatggtcctcaggttggccaatgggactgtaaagaccgccttagatttctt
gaagaagagtacttttttcgatgttggtgctgtggttgttcagaagtgaatgaatctgat
cttgtaattagtggattttgttgtgttaatccaaattgctctggagtggttttagacaat
cttgtggctaactgtgaaaagcagaagcctaatgttccagaaacaataagcaacaagtct
catttgcaggtacacgagctcaaggatattgacatcaagaaagtggctcaaatttcactt
gatcaaacacaaagttccttccatgttgattctgggtattgcttgaaatgcggttcttat
tgcaattttgcatctaggagcaaagaagttaaaaaagcttggactgatttcagaaggttg
caggattcaatagcttcaaaagatacgtgcagtactaaccttccagatgctttgagatct
cttggtcttctaagatcaatactgcatgcttataacaaaggcattgcagaagcagaggac
attcttgcgaaggcattttgtttcattggtgattttgagccagctagagaccattgtaaa
gcatccattgagatactggaaaagctctatggccccaatcacattgcaattggatatgaa
ttggcaaagcttgcatccattcagctagctctgggtgattgtactgctgtctataaaata
aatcgactgagtgccatattttctacatattatggaccacatgcaggcattatatttcct
tatctactggttcttgagagagaaaggagccgtatcattcaatga
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